RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 AKAP5P24588 427 aa17.22■□□□□ 0.35
CBWD3-216ENST00000621396 TFAMQ00059 246 aaKnown RBP17.22■□□□□ 0.35
CBWD3-216ENST00000621396 EPC2Q52LR7 807 aa17.22■□□□□ 0.35
CBWD3-216ENST00000621396 SPOPLQ6IQ16 392 aa17.22■□□□□ 0.35
CBWD3-216ENST00000621396 BRSK2Q8IWQ3 736 aa17.22■□□□□ 0.35
CBWD3-216ENST00000621396 EHBP1Q8NDI1 1231 aa17.22■□□□□ 0.35
CBWD3-216ENST00000621396 NXF3Q9H4D5 531 aaKnown RBP17.22■□□□□ 0.35
CBWD3-216ENST00000621396 AGO3Q9H9G7 860 aaKnown RBP17.22■□□□□ 0.35
CBWD3-216ENST00000621396 CEP72Q9P209 647 aa17.22■□□□□ 0.35
CBWD3-216ENST00000621396 GTPBP10A4D1E9 387 aaKnown RBP17.22■□□□□ 0.35
CBWD3-216ENST00000621396 STX10O60499 249 aa17.22■□□□□ 0.35
CBWD3-216ENST00000621396 CST3P01034 146 aaPredicted RBP17.22■□□□□ 0.35
CBWD3-216ENST00000621396 GHRP10912 638 aa17.22■□□□□ 0.35
CBWD3-216ENST00000621396 HSPA8P11142 646 aaKnown RBP17.22■□□□□ 0.35
CBWD3-216ENST00000621396 EFCAB13Q8IY85 973 aa17.22■□□□□ 0.35
CBWD3-216ENST00000621396 NME8Q8N427 588 aa17.22■□□□□ 0.35
CBWD3-216ENST00000621396 UBE2TQ9NPD8 197 aaPredicted RBP17.22■□□□□ 0.35
CBWD3-216ENST00000621396 SNTG2Q9NY99 539 aa17.22■□□□□ 0.35
CBWD3-216ENST00000621396 KIAA0100Q14667 2235 aaKnown RBP17.22■□□□□ 0.35
CBWD3-216ENST00000621396 A0A1W2PQJ5 194 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 M0QZ92 97 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 CDC42EP1Q00587 391 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 SESTD1Q86VW0 696 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 TATDN2Q93075 761 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 SPAG5Q96R06 1193 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 ADPGKQ9BRR6 497 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 SENP6Q9GZR1 1112 aaPredicted RBP17.21■□□□□ 0.35
CBWD3-216ENST00000621396 RAB20Q9NX57 234 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 DNAJC12Q9UKB3 198 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 ST3GAL5Q9UNP4 418 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 LACTBL1A8MY62 500 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 KIAA0391O15091 583 aaKnown RBP17.21■□□□□ 0.35
CBWD3-216ENST00000621396 CABYRO75952 493 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 VNN1O95497 513 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 C4BPAP04003 597 aaKnown RBP17.21■□□□□ 0.35
CBWD3-216ENST00000621396 NFICP08651 508 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 SLC10A6Q3KNW5 377 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 ZNF618Q5T7W0 954 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 PDXDC1Q6P996 788 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 PPM1KQ8N3J5 372 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 FBXL13Q8NEE6 735 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 TRIM6Q9C030 488 aaPredicted RBP17.21■□□□□ 0.35
CBWD3-216ENST00000621396 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 RPF1Q9H9Y2 349 aaKnown RBP17.21■□□□□ 0.35
CBWD3-216ENST00000621396 PLCB1Q9NQ66 1216 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 APEX2Q9UBZ4 518 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 TFR2Q9UP52 801 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 PLAGL2Q9UPG8 496 aa17.21■□□□□ 0.35
CBWD3-216ENST00000621396 LAMA3Q16787 3333 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 RPS6KA5O75582 802 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 GUCY2FP51841 1108 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 NCBP1Q09161 790 aaKnown RBP17.2■□□□□ 0.34
CBWD3-216ENST00000621396 CETN1Q12798 172 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 TSR1Q2NL82 804 aaKnown RBP17.2■□□□□ 0.34
CBWD3-216ENST00000621396 GLRA4Q5JXX5 417 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 NOTUMQ6P988 496 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 RSPH3Q86UC2 560 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 CCDC112Q8NEF3 446 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 ARID3AQ99856 593 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 KLK14Q9P0G3 267 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 ARHGAP20Q9P2F6 1191 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 TRPV2Q9Y5S1 764 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 MCF2P10911 925 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 CD52P31358 61 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 CLDN10P78369 228 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 ZACNQ401N2 412 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 SLC27A1Q6PCB7 646 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 C15orf39Q6ZRI6 1047 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 USP37Q86T82 979 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 ACRBPQ8NEB7 543 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 TSEN34Q9BSV6 310 aaKnown RBP17.2■□□□□ 0.34
CBWD3-216ENST00000621396 ACP6Q9NPH0 428 aa17.2■□□□□ 0.34
CBWD3-216ENST00000621396 MEIS3P2A8K0S8 358 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 ARHGAP6O43182 974 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 TWF2Q6IBS0 349 aaKnown RBP17.19■□□□□ 0.34
CBWD3-216ENST00000621396 JADE1Q6IE81 842 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 CCDC51Q96ER9 411 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 CGRRF1Q99675 332 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 NAA15Q9BXJ9 866 aaKnown RBP17.19■□□□□ 0.34
CBWD3-216ENST00000621396 NHEJ1Q9H9Q4 299 aaPredicted RBP17.19■□□□□ 0.34
CBWD3-216ENST00000621396 SPTLC3Q9NUV7 552 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 NRDCO43847 1150 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 PHACTR2O75167 634 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 GFPT2O94808 682 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 HLA-DRAP01903 254 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 HSPA1AP0DMV8 641 aaKnown RBP17.19■□□□□ 0.34
CBWD3-216ENST00000621396 HSPA1BP0DMV9 641 aaKnown RBP17.19■□□□□ 0.34
CBWD3-216ENST00000621396 PIK3CAP42336 1068 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 MGAT3Q09327 533 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 DRAP1Q14919 205 aaPredicted RBP17.19■□□□□ 0.34
CBWD3-216ENST00000621396 CYP26C1Q6V0L0 522 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 DIS3LQ8TF46 1054 aaKnown RBP17.19■□□□□ 0.34
CBWD3-216ENST00000621396 ACAP3Q96P50 834 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 GPR88Q9GZN0 384 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 PHF24Q9UPV7 400 aa17.19■□□□□ 0.34
CBWD3-216ENST00000621396 ARVCFO00192 962 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 DNM1LO00429 736 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 PQBP1O60828 265 aaKnown RBP17.18■□□□□ 0.34
CBWD3-216ENST00000621396 CALCAP01258 141 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 TFRCP02786 760 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms