RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 MAPK4P31152 587 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 TMEM62Q0P6H9 643 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 ACVR2BQ13705 512 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 RPS6KA1Q15418 735 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 FAM110CQ1W6H9 321 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 TDRD10Q5VZ19 366 aaKnown RBP10.69□□□□□ -0.7
VTA1-205ENST00000620996 PEX26Q7Z412 305 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 FAM49AQ9H0Q0 323 aaPredicted RBP10.69□□□□□ -0.7
VTA1-205ENST00000620996 THAP2Q9H0W7 228 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 SLC45A1Q9Y2W3 748 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 WDR81Q562E7 1941 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 PTPRJQ12913 1337 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 FTLP02792 175 aaPredicted RBP10.69□□□□□ -0.7
VTA1-205ENST00000620996 MMEP08473 750 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 SMPD1P17405 629 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 PSMD6Q15008 389 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 CCDC70Q6NSX1 233 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 PHLDB2Q86SQ0 1253 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 NOP9Q86U38 636 aaKnown RBP10.69□□□□□ -0.7
VTA1-205ENST00000620996 EXOC8Q8IYI6 725 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 OR5B17Q8NGF7 314 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 PNKPQ96T60 521 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 TLR10Q9BXR5 811 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 IMPG2Q9BZV3 1241 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 C2orf40Q9H1Z8 148 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 TMEM134Q9H6X4 195 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 SLC5A4Q9NY91 659 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 MORF4L1Q9UBU8 362 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 A0A087WZ62 844 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 A0A0B4J269 797 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 H3BRB1 525 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 IGF2BP3O00425 579 aaKnown RBP eCLIP10.68□□□□□ -0.7
VTA1-205ENST00000620996 TOM1L1O75674 476 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 KRT19P08727 400 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 SLC26A2P50443 739 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 PPFIA1Q13136 1202 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 KIF22Q14807 665 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 ATF7IP2Q5U623 682 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 KRT222Q8N1A0 295 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 FDXACB1Q9BRP7 624 aaPredicted RBP10.68□□□□□ -0.7
VTA1-205ENST00000620996 RASSF4Q9H2L5 321 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 TUT1Q9H6E5 874 aaKnown RBP10.68□□□□□ -0.7
VTA1-205ENST00000620996 UNCXA6NJT0 531 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 H2AFXP16104 143 aaPredicted RBP10.68□□□□□ -0.7
VTA1-205ENST00000620996 TMOD1P28289 359 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 GPC3P51654 580 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 GRB14Q14449 540 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 CRELD2Q6UXH1 353 aaPredicted RBP10.68□□□□□ -0.7
VTA1-205ENST00000620996 SCARA5Q6ZMJ2 495 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 CEP120Q8N960 986 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 PPTC7Q8NI37 304 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 SLC35G2Q8TBE7 412 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 HELQQ8TDG4 1101 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 MORC4Q8TE76 937 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 ARHGEF26Q96DR7 871 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 MYCBPQ99417 103 aaPredicted RBP10.68□□□□□ -0.7
VTA1-205ENST00000620996 MTMR12Q9C0I1 747 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 ANKZF1Q9H8Y5 726 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 ARFGAP3Q9NP61 516 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 ABT1Q9ULW3 272 aaKnown RBP10.68□□□□□ -0.7
VTA1-205ENST00000620996 PCDHB4Q9Y5E5 795 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 DCAF8L1A6NGE4 600 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 GAS2O43903 313 aaKnown RBP10.68□□□□□ -0.7
VTA1-205ENST00000620996 CEP104O60308 925 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 CD58P19256 250 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 ANXA13P27216 316 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 GTF2H1P32780 548 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 CYP2C19P33261 490 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 TNFAIP2Q03169 654 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 TRPC3Q13507 836 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 SLC30A5Q8TAD4 765 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 LMBR1Q8WVP7 490 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 CPB2Q96IY4 423 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 ACO2Q99798 780 aaKnown RBP10.68□□□□□ -0.7
VTA1-205ENST00000620996 TSKSQ9UJT2 592 aa10.68□□□□□ -0.7
VTA1-205ENST00000620996 MYH10P35580 1976 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 KIAA0391O15091 583 aaKnown RBP10.67□□□□□ -0.7
VTA1-205ENST00000620996 POLR3GO15318 223 aaPredicted RBP10.67□□□□□ -0.7
VTA1-205ENST00000620996 MSCO60682 206 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 C22orf31O95567 290 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 TMEM191BP0C7N4 346 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 CYP11B1P15538 503 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 PHKA2P46019 1235 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 NCOA4Q13772 614 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 EEF1DP3Q658K8 133 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 CHADLQ6NUI6 762 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 CREG2Q8IUH2 290 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 PASD1Q8IV76 773 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 ABRAQ8N0Z2 381 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 TPCN2Q8NHX9 752 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 EPS8L1Q8TE68 723 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 VTI1AQ96AJ9 217 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 CGRRF1Q99675 332 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 ABHD16BQ9H3Z7 469 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 MINDY3Q9H8M7 445 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 ZNFX1Q9P2E3 1918 aaKnown RBP10.67□□□□□ -0.7
VTA1-205ENST00000620996 FGFR4P22455 802 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 VSNL1P62760 191 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 CFAP221Q4G0U5 840 aa10.67□□□□□ -0.7
VTA1-205ENST00000620996 ZNF394Q53GI3 561 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms