RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 MIS18BP1Q6P0N0 1132 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 VSTM1Q6UX27 236 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 CRELD2Q6UXH1 353 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 RNF207Q6ZRF8 634 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ECHDC2Q86YB7 292 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ZSWIM2Q8NEG5 633 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 TTC8Q8TAM2 541 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 RNF217Q8TC41 542 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 DTX3LQ8TDB6 740 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 KIFAP3Q92845 792 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 TSNARE1Q96NA8 513 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 AGPAT1Q99943 283 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 PIDD1Q9HB75 910 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 TRAF3IP3Q9Y228 551 aa7.42□□□□□ -1.22
NEDD9-216ENST00000620854 ZBTB12Q9Y330 459 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-216ENST00000620854 BCORQ6W2J9 1755 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 CASZ1Q86V15 1759 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 PASKQ96RG2 1323 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 PODXLO00592 558 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 SGPL1O95470 568 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 BCRP11274 1271 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 CHRNB2P17787 502 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 EPHB2P29323 1055 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 ITGA8P53708 1063 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 POLE2P56282 527 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 MYL7Q01449 175 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 SLMAPQ14BN4 828 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 PPP4R3CPQ6ZMV5 832 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 ZNF354CQ86Y25 554 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 CCDC97Q96F63 343 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-216ENST00000620854 P2RX7Q99572 595 aaKnown RBP7.41□□□□□ -1.22
NEDD9-216ENST00000620854 MYLK2Q9H1R3 596 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 C12orf65Q9H3J6 166 aaKnown RBP7.41□□□□□ -1.22
NEDD9-216ENST00000620854 PARP4Q9UKK3 1724 aaKnown RBP7.41□□□□□ -1.22
NEDD9-216ENST00000620854 ESYT2A0FGR8 921 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 GAS7O60861 476 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 CETPP11597 493 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 PSMC4P43686 418 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 AP1ARQ63HQ0 302 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 GADL1Q6ZQY3 521 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 CTAGE3PQ8IX95 158 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 VPS52Q8N1B4 723 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 MAB21L3Q8N8X9 362 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 ZNF653Q96CK0 615 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 ZSWIM1Q9BR11 485 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 NUP85Q9BW27 656 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 DNAJC18Q9H819 358 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 APEX2Q9UBZ4 518 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 NAALADL1Q9UQQ1 740 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 EMSYQ7Z589 1322 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 SPDYE5A6NIY4 337 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 GAS8O95995 478 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 ATP5DP30049 168 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 FOXN2P32314 431 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 TUBP50607 506 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 GPC5P78333 572 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 OVGP1Q12889 678 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 RRP1BQ14684 758 aaKnown RBP7.41□□□□□ -1.22
NEDD9-216ENST00000620854 PSMD6Q15008 389 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 NBPF20Q3BBV1 942 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 KAZNQ674X7 775 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 POTEAQ6S8J7 498 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 HHIPL2Q6UWX4 724 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 EPM2AIP1Q7L775 607 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-216ENST00000620854 SLC47A2Q86VL8 602 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 SLC13A5Q86YT5 568 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-216ENST00000620854 ARHGEF19Q8IW93 802 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 SYT2Q8N9I0 419 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-216ENST00000620854 CCHCR1Q8TD31 782 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 SLC5A5Q92911 643 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 LRRC37BQ96QE4 947 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 FERMT1Q9BQL6 677 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 KLHL11Q9NVR0 708 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 DLGAP2Q9P1A6 1054 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 CCPG1Q9ULG6 757 aa7.41□□□□□ -1.22
NEDD9-216ENST00000620854 SYNGAP1Q96PV0 1343 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 A0A0A6YYK5 440 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-216ENST00000620854 GOLGA8RI6L899 631 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 SMNDC1O75940 238 aaKnown RBP eCLIP7.4□□□□□ -1.22
NEDD9-216ENST00000620854 POLR2MP0CAP2 368 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 TNNI1P19237 187 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 STAT2P52630 851 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 RIPK1Q13546 671 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 RASA3Q14644 834 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 BSPRYQ5W0U4 402 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 RINT1Q6NUQ1 792 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 RSBN1LQ6PCB5 846 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-216ENST00000620854 KLF6Q99612 283 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-216ENST00000620854 EIF2AK1Q9BQI3 630 aaKnown RBP7.4□□□□□ -1.22
NEDD9-216ENST00000620854 KIAA1683Q9H0B3 1180 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 RXFP1Q9HBX9 757 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 BATF3Q9NR55 127 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 ANAPC5Q9UJX4 755 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 GOLGA8SH3BPF8 625 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 GOLGA8MH3BSY2 632 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 MAP3K13O43283 966 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 ATF7P17544 494 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-216ENST00000620854 MUM1Q2TAK8 710 aa7.4□□□□□ -1.22
NEDD9-216ENST00000620854 ZNF564Q8TBZ8 553 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-216ENST00000620854 UTP4Q969X6 686 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms