RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 FBXL13Q8NEE6 735 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 SPATA4Q8NEY3 305 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 ATP8B4Q8TF62 1192 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 BBXQ8WY36 941 aaPredicted RBP18.88■□□□□ 0.61
CNOT3-209ENST00000617930 SHC3Q92529 594 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 EXOC4Q96A65 974 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 LENG1Q96BZ8 264 aaPredicted RBP18.88■□□□□ 0.61
CNOT3-209ENST00000617930 AZI2Q9H6S1 392 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 VPS18Q9P253 973 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 AGO2Q9UKV8 859 aaKnown RBP18.88■□□□□ 0.61
CNOT3-209ENST00000617930 ATP8B3O60423 1300 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 A0A0B4J269 797 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 H0YCG3 227 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 CYP26A1O43174 497 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 CA12O43570 354 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 CALCAP01258 141 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 STRN3Q13033 797 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 PLPPR4Q7Z2D5 763 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 SLFN11Q7Z7L1 901 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 VPS36Q86VN1 386 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 EPS8L1Q8TE68 723 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 HDAC7Q8WUI4 952 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 RPGRIP1Q96KN7 1286 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 HINFPQ9BQA5 517 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 CCDC113Q9H0I3 377 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 THAP2Q9H0W7 228 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 RNPEPQ9H4A4 650 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 INTUQ9ULD6 942 aa18.88■□□□□ 0.61
CNOT3-209ENST00000617930 SIP14410 1827 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 FAM189A1O60320 539 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 MSCO60682 206 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 ZMYND10O75800 440 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 C4BPAP04003 597 aaKnown RBP18.87■□□□□ 0.61
CNOT3-209ENST00000617930 HOXC6P09630 235 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 CYP2B6P20813 491 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 TNFAIP3P21580 790 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 GTF2H1P32780 548 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 NOP2P46087 812 aaKnown RBP18.87■□□□□ 0.61
CNOT3-209ENST00000617930 ACVR2BQ13705 512 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 PSMD6Q15008 389 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 HSP90B2PQ58FF3 399 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 ZNF668Q96K58 619 aaPredicted RBP18.87■□□□□ 0.61
CNOT3-209ENST00000617930 TMEM134Q9H6X4 195 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 ADAM21Q9UKJ8 722 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 COG5Q9UP83 839 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 STXBP5LQ9Y2K9 1186 aa18.87■□□□□ 0.61
CNOT3-209ENST00000617930 A0A0A6YYK5 440 aaPredicted RBP18.86■□□□□ 0.61
CNOT3-209ENST00000617930 NOP56O00567 594 aaKnown RBP18.86■□□□□ 0.61
CNOT3-209ENST00000617930 VNN1O95497 513 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 ABCB4P21439 1286 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 USP8P40818 1118 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 LMAN1P49257 510 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 LAMTOR4Q0VGL1 99 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 MAP9Q49MG5 647 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 TDRD10Q5VZ19 366 aaKnown RBP18.86■□□□□ 0.61
CNOT3-209ENST00000617930 RPUSD2Q8IZ73 545 aaKnown RBP18.86■□□□□ 0.61
CNOT3-209ENST00000617930 SLC35G2Q8TBE7 412 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 AFG1LQ8WV93 481 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 ANKFY1Q9P2R3 1169 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 CNTNAP2Q9UHC6 1331 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 TMEM253P0C7T8 217 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 SRGAP2CP0DJJ0 459 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 HNRNPH2P55795 449 aaKnown RBP18.86■□□□□ 0.61
CNOT3-209ENST00000617930 HTRA3P83110 453 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 MMGT1Q8N4V1 131 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 ZNF784Q8NCA9 323 aaPredicted RBP18.86■□□□□ 0.61
CNOT3-209ENST00000617930 CAPNS2Q96L46 248 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 PSD3Q9NYI0 1048 aa18.86■□□□□ 0.61
CNOT3-209ENST00000617930 ABLIM1O14639 778 aa18.85■□□□□ 0.61
CNOT3-209ENST00000617930 ZNF865P0CJ78 1059 aaPredicted RBP18.85■□□□□ 0.61
CNOT3-209ENST00000617930 TNFSF9P41273 254 aa18.85■□□□□ 0.61
CNOT3-209ENST00000617930 TNNT3P45378 269 aaPredicted RBP18.85■□□□□ 0.61
CNOT3-209ENST00000617930 ENPEPQ07075 957 aa18.85■□□□□ 0.61
CNOT3-209ENST00000617930 ZACNQ401N2 412 aa18.85■□□□□ 0.61
CNOT3-209ENST00000617930 CDCA2Q69YH5 1023 aaPredicted RBP18.85■□□□□ 0.61
CNOT3-209ENST00000617930 LRRC1Q9BTT6 524 aa18.85■□□□□ 0.61
CNOT3-209ENST00000617930 RBM12Q9NTZ6 932 aaKnown RBP18.85■□□□□ 0.61
CNOT3-209ENST00000617930 SEPT11Q9NVA2 429 aaKnown RBP18.85■□□□□ 0.61
CNOT3-209ENST00000617930 KCNG1Q9UIX4 513 aa18.85■□□□□ 0.61
CNOT3-209ENST00000617930 NCANO14594 1321 aa18.85■□□□□ 0.61
CNOT3-209ENST00000617930 MMEP08473 750 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 MYBL2P10244 700 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 MATR3P43243 847 aaKnown RBP eCLIP18.84■□□□□ 0.61
CNOT3-209ENST00000617930 FMO1Q01740 532 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 ITIH3Q06033 890 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 IER5Q5VY09 327 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 SPOPLQ6IQ16 392 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 OR5B17Q8NGF7 314 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 DDX1Q92499 740 aaKnown RBP18.84■□□□□ 0.61
CNOT3-209ENST00000617930 ZBTB9Q96C00 473 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 FAM167AQ96KS9 214 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 MSTO1Q9BUK6 570 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 ISCUQ9H1K1 167 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 ABHD16BQ9H3Z7 469 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 CHORDC1Q9UHD1 332 aaPredicted RBP18.84■□□□□ 0.61
CNOT3-209ENST00000617930 DMGDHQ9UI17 866 aaKnown RBP18.84■□□□□ 0.61
CNOT3-209ENST00000617930 GABRQQ9UN88 632 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 BUB1BO60566 1050 aaPredicted RBP18.84■□□□□ 0.61
CNOT3-209ENST00000617930 KIF4AO95239 1232 aa18.84■□□□□ 0.61
CNOT3-209ENST00000617930 GH1P01241 217 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms