RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 THP07101 528 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 FOSL2P15408 326 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 GARTP22102 1010 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 ACOT2P49753 483 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 SNRPFP62306 86 aaKnown RBP18.7■□□□□ 0.58
SBDS-205ENST00000617799 PPP2R3AQ06190 1150 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 STIM1Q13586 685 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 KNOP1Q1ED39 458 aaKnown RBP18.7■□□□□ 0.58
SBDS-205ENST00000617799 BMT2Q1RMZ1 405 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 COBLL1Q53SF7 1204 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 ZBTB41Q5SVQ8 909 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 SAAL1Q96ER3 474 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 SNX27Q96L92 541 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 PCIF1Q9H4Z3 704 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 SPG21Q9NZD8 308 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 CGNQ9P2M7 1197 aaKnown RBP18.7■□□□□ 0.58
SBDS-205ENST00000617799 PLAGL2Q9UPG8 496 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 MAPK8IP1Q9UQF2 711 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 PCDHA5Q9Y5H7 936 aa18.7■□□□□ 0.58
SBDS-205ENST00000617799 CARNS1A5YM72 827 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 NT5C1B-RDH14C9J2C7 533 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 H3BNC9 293 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 PTGESO14684 152 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 B4GALT3O60512 393 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 FGF18O76093 207 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 ADSSP30520 456 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 HOXD13P35453 343 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 OR1G1P47890 313 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 CAMK4Q16566 473 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 CT47A1Q5JQC4 288 aaPredicted RBP18.69■□□□□ 0.58
SBDS-205ENST00000617799 ZNF658Q5TYW1 1059 aaPredicted RBP18.69■□□□□ 0.58
SBDS-205ENST00000617799 RBM43Q6ZSC3 357 aaKnown RBP18.69■□□□□ 0.58
SBDS-205ENST00000617799 GSTCDQ8NEC7 633 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 P2RX5Q93086 422 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 CBWD1Q9BRT8 395 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 FAM213AQ9BRX8 229 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 ANP32EQ9BTT0 268 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 CXCL16Q9H2A7 254 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 ALG13Q9NP73 1137 aaKnown RBP18.69■□□□□ 0.58
SBDS-205ENST00000617799 DACH1Q9UI36 760 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 FAN1Q9Y2M0 1017 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 PRG3Q9Y2Y8 225 aaPredicted RBP18.69■□□□□ 0.58
SBDS-205ENST00000617799 CITO14578 2027 aa18.69■□□□□ 0.58
SBDS-205ENST00000617799 GOLGA8IPA6NC78 632 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 CASTOR2A6NHX0 329 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 GOLGA8JA6NMD2 632 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 FAM189A1O60320 539 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 ALDH2P05091 517 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 SLC11A1P49279 550 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 CYP2J2P51589 502 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 KRT17Q04695 432 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 TUSC3Q13454 348 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 ENOX2Q16206 610 aaKnown RBP18.68■□□□□ 0.58
SBDS-205ENST00000617799 PTPROQ16827 1216 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 SLC10A6Q3KNW5 377 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 SMYD4Q8IYR2 804 aaPredicted RBP18.68■□□□□ 0.58
SBDS-205ENST00000617799 MICALL1Q8N3F8 863 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 GOLGA5Q8TBA6 731 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 TMEM169Q96HH4 297 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 TMEM175Q9BSA9 504 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 PLEKHA5Q9HAU0 1116 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 AGPAT3Q9NRZ7 376 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 SLC38A7Q9NVC3 462 aa18.68■□□□□ 0.58
SBDS-205ENST00000617799 CPSF3Q9UKF6 684 aaKnown RBP18.68■□□□□ 0.58
SBDS-205ENST00000617799 SMIM28A0A1B0GU29 152 aa18.67■□□□□ 0.58
SBDS-205ENST00000617799 KIAA0391O15091 583 aaKnown RBP18.67■□□□□ 0.58
SBDS-205ENST00000617799 CLIC2O15247 247 aa18.67■□□□□ 0.58
SBDS-205ENST00000617799 GRM6O15303 877 aa18.67■□□□□ 0.58
SBDS-205ENST00000617799 TGFB1I1O43294 461 aa18.67■□□□□ 0.58
SBDS-205ENST00000617799 LDHAP00338 332 aaKnown RBP18.67■□□□□ 0.58
SBDS-205ENST00000617799 ITGB1P05556 798 aa18.67■□□□□ 0.58
SBDS-205ENST00000617799 GALTP07902 379 aa18.67■□□□□ 0.58
SBDS-205ENST00000617799 DSC1Q08554 894 aa18.67■□□□□ 0.58
SBDS-205ENST00000617799 ISM2Q6H9L7 571 aa18.67■□□□□ 0.58
SBDS-205ENST00000617799 COLGALT2Q8IYK4 626 aa18.67■□□□□ 0.58
SBDS-205ENST00000617799 SLC39A11Q8N1S5 342 aa18.67■□□□□ 0.58
SBDS-205ENST00000617799 GPD1LQ8N335 351 aa18.67■□□□□ 0.58
SBDS-205ENST00000617799 HSPBP1Q9NZL4 362 aa18.67■□□□□ 0.58
SBDS-205ENST00000617799 CNTN3Q9P232 1028 aa18.67■□□□□ 0.58
SBDS-205ENST00000617799 CACNG4Q9UBN1 327 aa18.67■□□□□ 0.58
SBDS-205ENST00000617799 LACTBL1A8MY62 500 aa18.66■□□□□ 0.58
SBDS-205ENST00000617799 BIN1O00499 593 aa18.66■□□□□ 0.58
SBDS-205ENST00000617799 NRP1O14786 923 aa18.66■□□□□ 0.58
SBDS-205ENST00000617799 EXTL3O43909 919 aa18.66■□□□□ 0.58
SBDS-205ENST00000617799 SPAG1Q07617 926 aa18.66■□□□□ 0.58
SBDS-205ENST00000617799 CAVIN1Q6NZI2 390 aaKnown RBP18.66■□□□□ 0.58
SBDS-205ENST00000617799 SASS6Q6UVJ0 657 aa18.66■□□□□ 0.58
SBDS-205ENST00000617799 ALKAL1Q6UXT8 129 aa18.66■□□□□ 0.58
SBDS-205ENST00000617799 GUF1Q8N442 669 aaKnown RBP18.66■□□□□ 0.58
SBDS-205ENST00000617799 RABGGTAQ92696 567 aa18.66■□□□□ 0.58
SBDS-205ENST00000617799 KIF12Q96FN5 646 aa18.66■□□□□ 0.58
SBDS-205ENST00000617799 PPP1R10Q96QC0 940 aaKnown RBP18.66■□□□□ 0.58
SBDS-205ENST00000617799 COLEC11Q9BWP8 271 aa18.66■□□□□ 0.58
SBDS-205ENST00000617799 RBAKQ9NYW8 714 aaPredicted RBP18.66■□□□□ 0.58
SBDS-205ENST00000617799 PUF60Q9UHX1 559 aaKnown RBP18.66■□□□□ 0.58
SBDS-205ENST00000617799 MAN1B1Q9UKM7 699 aa18.66■□□□□ 0.58
SBDS-205ENST00000617799 PLXNA4Q9HCM2 1894 aa18.66■□□□□ 0.58
SBDS-205ENST00000617799 TTC26A0AVF1 554 aa18.65■□□□□ 0.58
SBDS-205ENST00000617799 MEFVO15553 781 aaPredicted RBP18.65■□□□□ 0.58
SBDS-205ENST00000617799 LPXNO60711 386 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms