RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ZC3H3Q8IXZ2 948 aaKnown RBP16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 SNX27Q96L92 541 aa16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 RPS6KC1Q96S38 1066 aa16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 YME1L1Q96TA2 773 aa16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 NAT10Q9H0A0 1025 aaKnown RBP16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 PLEKHA5Q9HAU0 1116 aa16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 RBAKQ9NYW8 714 aaPredicted RBP16.98■□□□□ 0.31
PCDHGC3-204ENST00000617222 MICAL3Q7RTP6 2002 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 TTC26A0AVF1 554 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 FGFR1OPO95684 399 aaKnown RBP16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 POMCP01189 267 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 SCNN1GP51170 649 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 RABGGTBP53611 331 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 WNT7BP56706 349 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 POU5F1Q01860 360 aaKnown RBP16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 PPP2R3AQ06190 1150 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 SPAG1Q07617 926 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 XKR4Q5GH76 650 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 SPATA1Q5VX52 437 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 FILIP1Q7Z7B0 1213 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 FAM186BQ8IYM0 893 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 GSTCDQ8NEC7 633 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 ENOX1Q8TC92 643 aaKnown RBP16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 URGCPQ8TCY9 931 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 ZNF689Q96CS4 500 aaPredicted RBP16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 MFSD14AQ96MC6 490 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 CEP63Q96MT8 703 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 RAD9AQ99638 391 aa16.97■□□□□ 0.31
PCDHGC3-204ENST00000617222 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 SMIM28A0A1B0GU29 152 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 INPPL1O15357 1258 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 TLL1O43897 1013 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 IL18RAPO95256 599 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 EPB41P11171 864 aaKnown RBP16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 ZNF165P49910 485 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 HTRA4P83105 476 aaPredicted RBP16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 CYP24A1Q07973 514 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 GLRA4Q5JXX5 417 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 LRSAM1Q6UWE0 723 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 CD302Q8IX05 232 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 CCDC127Q96BQ5 260 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 ZMAT2Q96NC0 199 aaKnown RBP16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 MKNK1Q9BUB5 465 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 PDE11AQ9HCR9 933 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 CNTN3Q9P232 1028 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 KANSL3Q9P2N6 904 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 INSL6Q9Y581 213 aa16.96■□□□□ 0.31
PCDHGC3-204ENST00000617222 PTGESO14684 152 aa16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 MAPK13O15264 365 aa16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 SLC16A3O15427 465 aaKnown RBP16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 MYOGP15173 224 aa16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 KCNE1P15382 129 aa16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 ZNF445P59923 1031 aa16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 BTG3Q14201 252 aaPredicted RBP16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 PSMD6Q15008 389 aa16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 PRPF38BQ5VTL8 546 aaKnown RBP16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 JADE1Q6IE81 842 aa16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 CREBRFQ8IUR6 639 aa16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 KIF12Q96FN5 646 aa16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 TSPY26PQ9H489 355 aa16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 ASB7Q9H672 318 aa16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 RC3H2Q9HBD1 1191 aaKnown RBP16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 TBC1D13Q9NVG8 400 aa16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 PLAGL2Q9UPG8 496 aa16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 COLQQ9Y215 455 aaPredicted RBP16.95■□□□□ 0.3
PCDHGC3-204ENST00000617222 THP07101 528 aa16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 DLATP10515 647 aaKnown RBP16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 KRT13P13646 458 aa16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 MYL5Q02045 173 aa16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 RNASELQ05823 741 aaKnown RBP16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 SURF1Q15526 300 aa16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 CCDC40Q4G0X9 1142 aa16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 CMTR2Q8IYT2 770 aaKnown RBP16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 AOPEPQ8N6M6 819 aa16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 PLEKHO2Q8TD55 490 aa16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 BORCS6Q96GS4 357 aa16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 FNBP1Q96RU3 617 aa16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 POP1Q99575 1024 aaKnown RBP16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 BPIFA3Q9BQP9 254 aa16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 MRPL9Q9BYD2 267 aaKnown RBP16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 THAP9Q9H5L6 903 aa16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 SAMSN1Q9NSI8 373 aaKnown RBP16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 HCSTQ9UBK5 93 aa16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 NFE2L3Q9Y4A8 694 aa16.94■□□□□ 0.3
PCDHGC3-204ENST00000617222 DDHD2O94830 711 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 GNA14O95837 355 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 NFICP08651 508 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 TNNI1P19237 187 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 VAMP7P51809 220 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 GRIK3Q13003 919 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 TMEM132DQ14C87 1099 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 ZBTB6Q15916 424 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 LMBRD2Q68DH5 695 aaPredicted RBP16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 INTS8Q75QN2 995 aaKnown RBP16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 FRMD5Q7Z6J6 570 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 ZNF280BQ86YH2 543 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 IRF2BP1Q8IU81 584 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 EFCAB13Q8IY85 973 aa16.93■□□□□ 0.3
PCDHGC3-204ENST00000617222 LRRC43Q8N309 656 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms