RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 NUDCD3Q8IVD9 361 aa19.73■□□□□ 0.75
CDH23-212ENST00000616684 TMEM117Q9H0C3 514 aa19.73■□□□□ 0.75
CDH23-212ENST00000616684 FAM96AQ9H5X1 160 aa19.73■□□□□ 0.75
CDH23-212ENST00000616684 C19orf81C9J6K1 198 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 POLRMTO00411 1230 aaKnown RBP19.72■□□□□ 0.75
CDH23-212ENST00000616684 MDH1P40925 334 aaKnown RBP19.72■□□□□ 0.75
CDH23-212ENST00000616684 NOP14P78316 857 aaKnown RBP19.72■□□□□ 0.75
CDH23-212ENST00000616684 GRB10Q13322 594 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 MXD4Q14582 209 aaPredicted RBP19.72■□□□□ 0.75
CDH23-212ENST00000616684 CCNYL1Q8N7R7 359 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 KCNH7Q9NS40 1196 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 PCDHB2Q9Y5E7 798 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 ALG6Q9Y672 507 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 SPATA31A5Q5VU36 1347 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 SPATA31A7Q8IWB4 1347 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 RAD51CO43502 376 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 CYP11B2P19099 503 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 CARSP49589 748 aaKnown RBP19.72■□□□□ 0.75
CDH23-212ENST00000616684 NTRK3Q16288 839 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 C9orf72Q96LT7 481 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 AGBL1Q96MI9 1066 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 AGXT2Q9BYV1 514 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 NVLO15381 856 aaKnown RBP19.72■□□□□ 0.75
CDH23-212ENST00000616684 PRKCEQ02156 737 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 FSCBQ5H9T9 825 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 FASTKD5Q7L8L6 764 aaKnown RBP19.72■□□□□ 0.75
CDH23-212ENST00000616684 ZNF560Q96MR9 790 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 TMEM39BQ9GZU3 492 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 FAF1Q9UNN5 650 aaPredicted RBP19.72■□□□□ 0.75
CDH23-212ENST00000616684 CCDC195A0A1B0GUA6 201 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 SMAD1Q15797 465 aaKnown RBP19.72■□□□□ 0.75
CDH23-212ENST00000616684 SYDE1Q6ZW31 735 aaPredicted RBP19.72■□□□□ 0.75
CDH23-212ENST00000616684 TEX2Q8IWB9 1127 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 RCOR2Q8IZ40 523 aa19.72■□□□□ 0.75
CDH23-212ENST00000616684 SYN2Q92777 582 aaPredicted RBP19.72■□□□□ 0.75
CDH23-212ENST00000616684 AGTP01019 485 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 PLEKP08567 350 aaPredicted RBP19.71■□□□□ 0.75
CDH23-212ENST00000616684 COMTP21964 271 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 EMC2Q15006 297 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 N4BP2L2Q92802 583 aaPredicted RBP19.71■□□□□ 0.75
CDH23-212ENST00000616684 RBM15Q96T37 977 aaKnown RBP eCLIP19.71■□□□□ 0.75
CDH23-212ENST00000616684 SENP7Q9BQF6 1050 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 SIK2Q9H0K1 926 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 H3BRJ5 948 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 ZFXP17010 805 aaPredicted RBP19.71■□□□□ 0.75
CDH23-212ENST00000616684 ESRRGP62508 458 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 PID1Q7Z2X4 250 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 ANKMY2Q8IV38 441 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 LRRC43Q8N309 656 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 POLR3CQ9BUI4 534 aaPredicted RBP19.71■□□□□ 0.75
CDH23-212ENST00000616684 SENP1Q9P0U3 644 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 WDR35Q9P2L0 1181 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 CDH16O75309 829 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 PDGFRAP16234 1089 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 HSPA9P38646 679 aaKnown RBP19.71■□□□□ 0.75
CDH23-212ENST00000616684 ERVK-24P63145 666 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 KYAT1Q16773 422 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 BTBD6Q96KE9 485 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 THEGQ9P2T0 379 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 HPCAL4Q9UM19 191 aa19.71■□□□□ 0.75
CDH23-212ENST00000616684 MSH4O15457 936 aa19.71■□□□□ 0.74
CDH23-212ENST00000616684 ASAP2O43150 1006 aa19.71■□□□□ 0.74
CDH23-212ENST00000616684 HLA-DRAP01903 254 aa19.71■□□□□ 0.74
CDH23-212ENST00000616684 ITIH2P19823 946 aa19.71■□□□□ 0.74
CDH23-212ENST00000616684 TYK2P29597 1187 aa19.71■□□□□ 0.74
CDH23-212ENST00000616684 YWHAHQ04917 246 aaPredicted RBP19.71■□□□□ 0.74
CDH23-212ENST00000616684 SGSM1Q2NKQ1 1148 aa19.71■□□□□ 0.74
CDH23-212ENST00000616684 TNIP3Q96KP6 325 aa19.71■□□□□ 0.74
CDH23-212ENST00000616684 SCAF8Q9UPN6 1271 aaKnown RBP19.71■□□□□ 0.74
CDH23-212ENST00000616684 SNX9Q9Y5X1 595 aa19.71■□□□□ 0.74
CDH23-212ENST00000616684 KIDINS220Q9ULH0 1771 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 GSTA4O15217 222 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 FOXP2O15409 715 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 PPARGP37231 505 aaPredicted RBP19.7■□□□□ 0.74
CDH23-212ENST00000616684 JAMLQ86YT9 394 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 USP38Q8NB14 1042 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 KBTBD4Q9NVX7 518 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 LMNAP02545 664 aaKnown RBP19.7■□□□□ 0.74
CDH23-212ENST00000616684 ACTR2P61160 394 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 ACAD11Q709F0 780 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 DDX42Q86XP3 938 aaKnown RBP eCLIP19.7■□□□□ 0.74
CDH23-212ENST00000616684 MOV10L1Q9BXT6 1211 aaKnown RBP19.7■□□□□ 0.74
CDH23-212ENST00000616684 L2HGDHQ9H9P8 463 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 ELP3Q9H9T3 547 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 TMEM8AQ9HCN3 771 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 FBXO28Q9NVF7 368 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 GTSE1Q9NYZ3 720 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 SUN2Q9UH99 717 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 DIP2BQ9P265 1576 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 POU5F1BQ06416 359 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 KIF19Q2TAC6 998 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 ITPRIPL1Q6GPH6 555 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 TRMT10CQ7L0Y3 403 aaKnown RBP19.7■□□□□ 0.74
CDH23-212ENST00000616684 GRAMD1AQ96CP6 724 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 TRABDQ9H4I3 376 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 SMYD3Q9H7B4 428 aa19.7■□□□□ 0.74
CDH23-212ENST00000616684 PIK3R2O00459 728 aa19.69■□□□□ 0.74
CDH23-212ENST00000616684 APOL1O14791 398 aa19.69■□□□□ 0.74
CDH23-212ENST00000616684 DIAPH2O60879 1101 aa19.69■□□□□ 0.74
CDH23-212ENST00000616684 MOCS2O96007 188 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms