RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 MMS22LQ6ZRQ5 1243 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 SV2AQ7L0J3 742 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 PNMA8AQ86V59 439 aaPredicted RBP14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 HDAC7Q8WUI4 952 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 HSPH1Q92598 858 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 SNX25Q9H3E2 840 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 PI4K2BG5E9Z4 385 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 PRPSAP2O60256 369 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 SASH3O75995 380 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 PGK2P07205 417 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 KCNJ1P48048 391 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 YWHAGP61981 247 aaKnown RBP eCLIP14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 TNFAIP2Q03169 654 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 LGSNQ5TDP6 509 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 ATP6V1G3Q96LB4 118 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 RAB21Q9UL25 225 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 TTLL3Q9Y4R7 772 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 PDE2AO00408 941 aaPredicted RBP14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 CYP2C19P33261 490 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 ANKRD13AQ8IZ07 590 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 OR2W6PQ8NHA6 318 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 BTBD6Q96KE9 485 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 TRIM7Q9C029 511 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 TMEM117Q9H0C3 514 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 SMARCAD1Q9H4L7 1026 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 NUB1Q9Y5A7 615 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 PJA2O43164 708 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 MMP14P50281 582 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 AP3M2P53677 418 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 FYB2Q5VWT5 728 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 DARS2Q6PI48 645 aaKnown RBP14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 CREG2Q8IUH2 290 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 ZIM3Q96PE6 472 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 CARD9Q9H257 536 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 KLHL11Q9NVR0 708 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 IP6K2Q9UHH9 426 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 PTPRAP18433 802 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 ADCY2Q08462 1091 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 TMED2Q15363 201 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 ZKSCAN8Q15776 578 aaPredicted RBP14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 CCDC14Q49A88 953 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 DHX38Q92620 1227 aaKnown RBP14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 RPS6KC1Q96S38 1066 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 PARVAQ9NVD7 372 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 MAD1L1Q9Y6D9 718 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 ATP9AO75110 1047 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 DDNO94850 711 aaPredicted RBP14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 BBS9Q3SYG4 887 aa14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 SREK1Q8WXA9 508 aaKnown RBP14.05□□□□□ -0.16
PPP4R3B-206ENST00000616407 H3BQF6 201 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 SLC25A27O95847 323 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 WEE2P0C1S8 567 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 CYP11B1P15538 503 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 HNRNPH3P31942 346 aaKnown RBP14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 CNTN2Q02246 1040 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 NFX1Q12986 1120 aaKnown RBP14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 NME8Q8N427 588 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 ZNF526Q8TF50 670 aaPredicted RBP14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 CNOT10Q9H9A5 744 aaKnown RBP14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 A1CFQ9NQ94 594 aaKnown RBP14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 EXOC1LA0A1B0GW35 172 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 TGFB1I1O43294 461 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 IFRD2Q12894 506 aaPredicted RBP14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 IER5Q5VY09 327 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 SLC47A2Q86VL8 602 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 SPATS2Q86XZ4 545 aaKnown RBP14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 CASKIN2Q8WXE0 1202 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 GTF3C4Q9UKN8 822 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 STRIP2Q9ULQ0 834 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 M0QYV0 167 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 GLI1P08151 1106 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 CDR2Q01850 454 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 VSIG10LQ86VR7 867 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 JAMLQ86YT9 394 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 ARHGEF19Q8IW93 802 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 CCHCR1Q8TD31 782 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 PRPF31Q8WWY3 499 aaKnown RBP14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 ISCUQ9H1K1 167 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 GANQ9H2C0 597 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 SAYSD1Q9NPB0 183 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 CD2APQ9Y5K6 639 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 MARF1Q9Y4F3 1742 aaKnown RBP14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 ZSCAN5CA6NGD5 496 aaPredicted RBP14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 PHF2O75151 1096 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 MAPTP10636 758 aaKnown RBP14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 GARTP22102 1010 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 DLG4P78352 724 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 KRT17Q04695 432 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 EFCAB12Q6NXP0 572 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 CFAP57Q96MR6 1250 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 SEPT10Q9P0V9 454 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 UBIAD1Q9Y5Z9 338 aa14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 AHDC1Q5TGY3 1603 aaPredicted RBP14.04□□□□□ -0.16
PPP4R3B-206ENST00000616407 GUCY1A3Q02108 690 aa14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 SGSM1Q2NKQ1 1148 aa14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 C2orf69Q8N8R5 385 aa14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 TATDN2Q93075 761 aa14.03□□□□□ -0.16
PPP4R3B-206ENST00000616407 KLHL14Q9P2G3 628 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms