RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 CCDC113Q9H0I3 377 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 TMEM134Q9H6X4 195 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 KCNG1Q9UIX4 513 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 DIS3Q9Y2L1 958 aaKnown RBP20.6■□□□□ 0.89
MMP28-204ENST00000615136 GOLGA6BA6NDN3 693 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 UNCXA6NJT0 531 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 MSCO60682 206 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 CLDN10P78369 228 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 CCNA1P78396 465 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 PSMD6Q15008 389 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 SPRYD7Q5W111 196 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 SLFN11Q7Z7L1 901 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 EPS8L1Q8TE68 723 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 PBKQ96KB5 322 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 PCDHB18PQ96TA0 734 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 HINFPQ9BQA5 517 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 MSTO1Q9BUK6 570 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 KATNBL1Q9H079 304 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 MORF4L1Q9UBU8 362 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 NOCTQ9UK39 431 aaKnown RBP20.6■□□□□ 0.89
MMP28-204ENST00000615136 TRPC6Q9Y210 931 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 SLC45A1Q9Y2W3 748 aa20.6■□□□□ 0.89
MMP28-204ENST00000615136 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.59■□□□□ 0.89
MMP28-204ENST00000615136 CCDC172P0C7W6 258 aa20.59■□□□□ 0.89
MMP28-204ENST00000615136 GTF2H1P32780 548 aa20.59■□□□□ 0.89
MMP28-204ENST00000615136 ABCD1P33897 745 aa20.59■□□□□ 0.89
MMP28-204ENST00000615136 ADCYAP1R1P41586 468 aa20.59■□□□□ 0.89
MMP28-204ENST00000615136 IER5Q5VY09 327 aa20.59■□□□□ 0.89
MMP28-204ENST00000615136 TDRD10Q5VZ19 366 aaKnown RBP20.59■□□□□ 0.89
MMP28-204ENST00000615136 IFT20Q8IY31 132 aa20.59■□□□□ 0.89
MMP28-204ENST00000615136 RPUSD2Q8IZ73 545 aaKnown RBP20.59■□□□□ 0.89
MMP28-204ENST00000615136 RNF149Q8NC42 400 aa20.59■□□□□ 0.89
MMP28-204ENST00000615136 GTF3C2Q8WUA4 911 aaPredicted RBP20.59■□□□□ 0.89
MMP28-204ENST00000615136 THAP2Q9H0W7 228 aa20.59■□□□□ 0.89
MMP28-204ENST00000615136 NCANO14594 1321 aa20.59■□□□□ 0.89
MMP28-204ENST00000615136 CLSTN1O94985 981 aa20.58■□□□□ 0.89
MMP28-204ENST00000615136 SNAI1O95863 264 aaPredicted RBP20.58■□□□□ 0.89
MMP28-204ENST00000615136 GLI1P08151 1106 aa20.58■□□□□ 0.89
MMP28-204ENST00000615136 TNNI1P19237 187 aa20.58■□□□□ 0.89
MMP28-204ENST00000615136 TNFSF9P41273 254 aa20.58■□□□□ 0.89
MMP28-204ENST00000615136 HNRNPH2P55795 449 aaKnown RBP20.58■□□□□ 0.89
MMP28-204ENST00000615136 RIN2Q8WYP3 895 aaPredicted RBP20.58■□□□□ 0.89
MMP28-204ENST00000615136 NT5C1BQ96P26 610 aa20.58■□□□□ 0.89
MMP28-204ENST00000615136 SMARCAD1Q9H4L7 1026 aa20.58■□□□□ 0.89
MMP28-204ENST00000615136 RBAKQ9NYW8 714 aaPredicted RBP20.58■□□□□ 0.89
MMP28-204ENST00000615136 EVPLQ92817 2033 aa20.58■□□□□ 0.88
MMP28-204ENST00000615136 KCNK3O14649 394 aa20.58■□□□□ 0.88
MMP28-204ENST00000615136 HEXIM1O94992 359 aaKnown RBP20.58■□□□□ 0.88
MMP28-204ENST00000615136 VNN1O95497 513 aa20.58■□□□□ 0.88
MMP28-204ENST00000615136 C4BPAP04003 597 aaKnown RBP20.58■□□□□ 0.88
MMP28-204ENST00000615136 ACTN2P35609 894 aa20.58■□□□□ 0.88
MMP28-204ENST00000615136 CLCN3P51790 818 aa20.58■□□□□ 0.88
MMP28-204ENST00000615136 MFAP3P55082 362 aa20.58■□□□□ 0.88
MMP28-204ENST00000615136 CDCA2Q69YH5 1023 aaPredicted RBP20.58■□□□□ 0.88
MMP28-204ENST00000615136 SPOPLQ6IQ16 392 aa20.58■□□□□ 0.88
MMP28-204ENST00000615136 GPR142Q7Z601 462 aa20.58■□□□□ 0.88
MMP28-204ENST00000615136 ZBTB33Q86T24 672 aa20.58■□□□□ 0.88
MMP28-204ENST00000615136 RHPN2Q8IUC4 686 aa20.58■□□□□ 0.88
MMP28-204ENST00000615136 ACTRT1Q8TDG2 376 aa20.58■□□□□ 0.88
MMP28-204ENST00000615136 KIAA1586Q9HCI6 787 aa20.58■□□□□ 0.88
MMP28-204ENST00000615136 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.58■□□□□ 0.88
MMP28-204ENST00000615136 FAM189A1O60320 539 aa20.57■□□□□ 0.88
MMP28-204ENST00000615136 TNNC1P63316 161 aa20.57■□□□□ 0.88
MMP28-204ENST00000615136 ZACNQ401N2 412 aa20.57■□□□□ 0.88
MMP28-204ENST00000615136 CST9Q5W186 159 aa20.57■□□□□ 0.88
MMP28-204ENST00000615136 SLFN12LQ6IEE8 588 aa20.57■□□□□ 0.88
MMP28-204ENST00000615136 SLC35G2Q8TBE7 412 aa20.57■□□□□ 0.88
MMP28-204ENST00000615136 LMBR1Q8WVP7 490 aa20.57■□□□□ 0.88
MMP28-204ENST00000615136 FNBP1Q96RU3 617 aa20.57■□□□□ 0.88
MMP28-204ENST00000615136 SH3GL2Q99962 352 aa20.57■□□□□ 0.88
MMP28-204ENST00000615136 SUCLA2Q9P2R7 463 aaPredicted RBP20.57■□□□□ 0.88
MMP28-204ENST00000615136 STXBP5LQ9Y2K9 1186 aa20.57■□□□□ 0.88
MMP28-204ENST00000615136 CNTNAP2Q9UHC6 1331 aa20.57■□□□□ 0.88
MMP28-204ENST00000615136 LOC102724159A0A0B4J2E5 919 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 RPS6KA5O75582 802 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 MMEP08473 750 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 TMEM253P0C7T8 217 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 CAPN2P17655 700 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 FKBP1BP68106 108 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 IGBP1P78318 339 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 PAK2Q13177 524 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 PWP2Q15269 919 aaKnown RBP20.56■□□□□ 0.88
MMP28-204ENST00000615136 ZSCAN26Q16670 478 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 USP37Q86T82 979 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 SYCE1Q8N0S2 351 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 C2orf69Q8N8R5 385 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 OR5B17Q8NGF7 314 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 CALR3Q96L12 384 aaKnown RBP20.56■□□□□ 0.88
MMP28-204ENST00000615136 KRT12Q99456 494 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 CHORDC1Q9UHD1 332 aaPredicted RBP20.56■□□□□ 0.88
MMP28-204ENST00000615136 COG5Q9UP83 839 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 ABLIM1O14639 778 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 HLA-DRAP01903 254 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 LGALS2P05162 132 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 GCLCP48506 637 aaPredicted RBP20.56■□□□□ 0.88
MMP28-204ENST00000615136 EFCAB12Q6NXP0 572 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 GOLGA6L1Q8N7Z2 621 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 TSEN2Q8NCE0 465 aaKnown RBP20.56■□□□□ 0.88
MMP28-204ENST00000615136 AFG1LQ8WV93 481 aa20.56■□□□□ 0.88
MMP28-204ENST00000615136 NLRP4Q96MN2 994 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms