RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 ALKAL1Q6UXT8 129 aa18.29■□□□□ 0.52
CBWD3-211ENST00000615061 DDX53Q86TM3 631 aaKnown RBP18.29■□□□□ 0.52
CBWD3-211ENST00000615061 PABPC5Q96DU9 382 aaKnown RBP18.29■□□□□ 0.52
CBWD3-211ENST00000615061 ZMAT2Q96NC0 199 aaKnown RBP18.29■□□□□ 0.52
CBWD3-211ENST00000615061 ACAP3Q96P50 834 aa18.29■□□□□ 0.52
CBWD3-211ENST00000615061 ZBP1Q9H171 429 aa18.29■□□□□ 0.52
CBWD3-211ENST00000615061 OLFML3Q9NRN5 406 aa18.29■□□□□ 0.52
CBWD3-211ENST00000615061 H3BQ06 376 aaPredicted RBP18.28■□□□□ 0.52
CBWD3-211ENST00000615061 ACTN4O43707 911 aaKnown RBP18.28■□□□□ 0.52
CBWD3-211ENST00000615061 IGFBP6P24592 240 aaPredicted RBP18.28■□□□□ 0.52
CBWD3-211ENST00000615061 CA8P35219 290 aa18.28■□□□□ 0.52
CBWD3-211ENST00000615061 LTBRP36941 435 aa18.28■□□□□ 0.52
CBWD3-211ENST00000615061 NDUFA8P51970 172 aa18.28■□□□□ 0.52
CBWD3-211ENST00000615061 YARSP54577 528 aaKnown RBP18.28■□□□□ 0.52
CBWD3-211ENST00000615061 TUSC3Q13454 348 aa18.28■□□□□ 0.52
CBWD3-211ENST00000615061 COL19A1Q14993 1142 aa18.28■□□□□ 0.52
CBWD3-211ENST00000615061 TAS1R1Q7RTX1 841 aa18.28■□□□□ 0.52
CBWD3-211ENST00000615061 HASPINQ8TF76 798 aa18.28■□□□□ 0.52
CBWD3-211ENST00000615061 ATXN2LQ8WWM7 1075 aaKnown RBP18.28■□□□□ 0.52
CBWD3-211ENST00000615061 SNX27Q96L92 541 aa18.28■□□□□ 0.52
CBWD3-211ENST00000615061 PPP1R10Q96QC0 940 aaKnown RBP18.28■□□□□ 0.52
CBWD3-211ENST00000615061 GOLPH3LQ9H4A5 285 aa18.28■□□□□ 0.52
CBWD3-211ENST00000615061 TLE6Q9H808 572 aa18.28■□□□□ 0.52
CBWD3-211ENST00000615061 GOLGA2P5Q9HBQ8 144 aa18.28■□□□□ 0.52
CBWD3-211ENST00000615061 SMIM28A0A1B0GU29 152 aa18.27■□□□□ 0.52
CBWD3-211ENST00000615061 FAM189A1O60320 539 aa18.27■□□□□ 0.52
CBWD3-211ENST00000615061 CXCL8P10145 99 aa18.27■□□□□ 0.52
CBWD3-211ENST00000615061 SCP2P22307 547 aa18.27■□□□□ 0.52
CBWD3-211ENST00000615061 AMPD3Q01432 767 aa18.27■□□□□ 0.52
CBWD3-211ENST00000615061 CUL4BQ13620 913 aa18.27■□□□□ 0.52
CBWD3-211ENST00000615061 CTC1Q2NKJ3 1217 aa18.27■□□□□ 0.52
CBWD3-211ENST00000615061 SLC10A6Q3KNW5 377 aa18.27■□□□□ 0.52
CBWD3-211ENST00000615061 CCDC65Q8IXS2 484 aa18.27■□□□□ 0.52
CBWD3-211ENST00000615061 TMEM130Q8N3G9 435 aa18.27■□□□□ 0.52
CBWD3-211ENST00000615061 C7orf25Q9BPX7 421 aa18.27■□□□□ 0.52
CBWD3-211ENST00000615061 NGRNQ9NPE2 291 aaKnown RBP18.27■□□□□ 0.52
CBWD3-211ENST00000615061 TOPORSQ9NS56 1045 aaPredicted RBP18.27■□□□□ 0.52
CBWD3-211ENST00000615061 ANK1P16157 1881 aa18.27■□□□□ 0.51
CBWD3-211ENST00000615061 C2orf71A6NGG8 1288 aa18.27■□□□□ 0.51
CBWD3-211ENST00000615061 GLP2RO95838 553 aa18.27■□□□□ 0.51
CBWD3-211ENST00000615061 MRPS5P82675 430 aaKnown RBP18.27■□□□□ 0.51
CBWD3-211ENST00000615061 SOX4Q06945 474 aaPredicted RBP18.27■□□□□ 0.51
CBWD3-211ENST00000615061 XKR4Q5GH76 650 aa18.27■□□□□ 0.51
CBWD3-211ENST00000615061 MRPL43Q8N983 215 aaKnown RBP18.27■□□□□ 0.51
CBWD3-211ENST00000615061 FSIP1Q8NA03 581 aa18.27■□□□□ 0.51
CBWD3-211ENST00000615061 PPP2R3CQ969Q6 453 aa18.27■□□□□ 0.51
CBWD3-211ENST00000615061 B3GALT6Q96L58 329 aa18.27■□□□□ 0.51
CBWD3-211ENST00000615061 ASB2Q96Q27 587 aa18.27■□□□□ 0.51
CBWD3-211ENST00000615061 LRRC27Q9C0I9 530 aa18.27■□□□□ 0.51
CBWD3-211ENST00000615061 MAGEF1Q9HAY2 307 aa18.27■□□□□ 0.51
CBWD3-211ENST00000615061 VWA8A3KMH1 1905 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 A0A0B4J269 797 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.26■□□□□ 0.51
CBWD3-211ENST00000615061 CARNS1A5YM72 827 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 TBX10O75333 385 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 NR1I2O75469 434 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 PRPF6O94906 941 aaKnown RBP18.26■□□□□ 0.51
CBWD3-211ENST00000615061 KIF4AO95239 1232 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 CXCL14O95715 111 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 EFEMP2O95967 443 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 SLFN14P0C7P3 912 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 CTSAP10619 480 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 SPAG1Q07617 926 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 SMC1AQ14683 1233 aaKnown RBP18.26■□□□□ 0.51
CBWD3-211ENST00000615061 L1TD1Q5T7N2 865 aaKnown RBP18.26■□□□□ 0.51
CBWD3-211ENST00000615061 PDE12Q6L8Q7 609 aaKnown RBP18.26■□□□□ 0.51
CBWD3-211ENST00000615061 CNNM4Q6P4Q7 775 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 CEP57L1Q8IYX8 460 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 VN1R2Q8NFZ6 395 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 PAGE5Q96GU1 130 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 MSTO1Q9BUK6 570 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 GPR62Q9BZJ7 368 aa18.26■□□□□ 0.51
CBWD3-211ENST00000615061 FAM237AA0A1B0GTK4 181 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 ADSSP30520 456 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 ABCD1P33897 745 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 SYKP43405 635 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 ADAM15Q13444 863 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 HSP90AA2PQ14568 343 aaPredicted RBP18.25■□□□□ 0.51
CBWD3-211ENST00000615061 CLUL1Q15846 466 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 DUSP6Q16828 381 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 RNF168Q8IYW5 571 aaPredicted RBP18.25■□□□□ 0.51
CBWD3-211ENST00000615061 EFHBQ8N7U6 833 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 C18orf25Q96B23 403 aaPredicted RBP18.25■□□□□ 0.51
CBWD3-211ENST00000615061 HVCN1Q96D96 273 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 COLEC11Q9BWP8 271 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 CNTN3Q9P232 1028 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 ADAM28Q9UKQ2 775 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 A0A1W2PQ27 194 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 A0A1W2PQ64 194 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 A0A1W2PQD8 194 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 C2CD2LO14523 706 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 OGTO15294 1046 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 SOD2P04179 222 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 CLCNKBP51801 687 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 PTPN14Q15678 1187 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 ENOX2Q16206 610 aaKnown RBP18.25■□□□□ 0.51
CBWD3-211ENST00000615061 FUT10Q6P4F1 479 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 UNC13DQ70J99 1090 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 ACCSQ96QU6 501 aa18.25■□□□□ 0.51
CBWD3-211ENST00000615061 PYM1Q9BRP8 204 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms