RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 DAB2IPQ5VWQ8 1189 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 OLFML2BQ68BL8 750 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 HDAC7Q8WUI4 952 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 CTNNBL1Q8WYA6 563 aaPredicted RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 ACO2Q99798 780 aaKnown RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 C16orf70Q9BSU1 422 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 CXCL16Q9H2A7 254 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 APOBEC3GQ9HC16 384 aaKnown RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 C1orf112Q9NSG2 853 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 ZNF446Q9NWS9 450 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 CTTNBP2NLQ9P2B4 639 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 SNX12Q9UMY4 172 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 NUB1Q9Y5A7 615 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 BZW2Q9Y6E2 419 aaKnown RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 ZC3H4Q9UPT8 1303 aaKnown RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 EVPLQ92817 2033 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 H0YCG3 227 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 CEP104O60308 925 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 BUB1BO60566 1050 aaPredicted RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 N4BP1O75113 896 aaKnown RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 TOM1L1O75674 476 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 GJB6O95452 261 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 C22orf31O95567 290 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 C4BPAP04003 597 aaKnown RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 CYP11B1P15538 503 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 CTGFP29279 349 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 MAPK4P31152 587 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 PRKCIP41743 596 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 RAP1GAPP47736 663 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 FKBP1BP68106 108 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 ZNF211Q13398 564 aaPredicted RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 NCOA4Q13772 614 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 MXD4Q14582 209 aaPredicted RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 BMS1Q14692 1282 aaKnown RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 MESDQ14696 234 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 GRIK4Q16099 956 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 PAPD7Q5XG87 772 aaKnown RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 SLFN12LQ6IEE8 588 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 AADACL2Q6P093 401 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 RSRC2Q7L4I2 434 aaKnown RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 CREG2Q8IUH2 290 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 KLHL7Q8IXQ5 586 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 KIAA0319LQ8IZA0 1049 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 EPS8L1Q8TE68 723 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 TCP11Q8WWU5 503 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 HVCN1Q96D96 273 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 FBXL18Q96ME1 805 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 OSMRQ99650 979 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 AP1M1Q9BXS5 423 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 KATNBL1Q9H079 304 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 ABHD16BQ9H3Z7 469 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 ANKZF1Q9H8Y5 726 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 IFT122Q9HBG6 1241 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 VTA1Q9NP79 307 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 CGNQ9P2M7 1197 aaKnown RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 MORF4L1Q9UBU8 362 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 COG5Q9UP83 839 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 PCDHB4Q9Y5E5 795 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 ZNFX1Q9P2E3 1918 aaKnown RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 PJA2O43164 708 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 AOC2O75106 756 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 PPFIA4O75335 1185 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 PGK1P00558 417 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 MMP3P08254 477 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 C6orf222P0C671 652 aaPredicted RBP3.7□□□□□ -1.82
LIG4-205ENST00000614526 CHRNB2P17787 502 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 CDH8P55286 799 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 VSNL1P62760 191 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 TRIM32Q13049 653 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 MAP2K5Q13163 448 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 TRPC3Q13507 836 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 HIC1Q14526 733 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 PSMD6Q15008 389 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 RPS6KA1Q15418 735 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 DGKDQ16760 1214 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 WHAMMP3Q1A5X7 153 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 ZACNQ401N2 412 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 DUSP28Q4G0W2 176 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 GLRA4Q5JXX5 417 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 TMCO3Q6UWJ1 677 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 PEX26Q7Z412 305 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 USP37Q86T82 979 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 TLK2Q86UE8 772 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 IFNL1Q8IU54 200 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 PPTC7Q8NI37 304 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 OLIG1Q8TAK6 271 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 TMC2Q8TDI7 906 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 DNAJB3Q8WWF6 145 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 TAF4BQ92750 862 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 LRRC1Q9BTT6 524 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 TRIM7Q9C029 511 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 ST7Q9NRC1 585 aa3.7□□□□□ -1.82
LIG4-205ENST00000614526 IGKV6-21A0A0C4DH24 114 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 ESYT3A0FGR9 886 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 ZSCAN5CA6NGD5 496 aaPredicted RBP3.69□□□□□ -1.82
LIG4-205ENST00000614526 DCAF8L1A6NGE4 600 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 ACKR2O00590 384 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 NFICP08651 508 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 TMEM191BP0C7N4 346 aa3.69□□□□□ -1.82
LIG4-205ENST00000614526 CCDC172P0C7W6 258 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms