RNA–Protein interactions for RNA: ENST00000607836.1

AC009961.1-203, humanhuman

TSL 1 (best) BASIC

Gene AC009961.1, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.1-203ENST00000607836 GPR20Q99678 358 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 NIFKQ9BYG3 293 aaKnown RBP16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 TRIM31Q9BZY9 425 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 TRIM7Q9C029 511 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 ISCUQ9H1K1 167 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 RNF14Q9UBS8 474 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 EVPLQ92817 2033 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 VNN1O95497 513 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 GPC5P78333 572 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 PPARDQ03181 441 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 MAP1SQ66K74 1059 aaPredicted RBP16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 RHPN2Q8IUC4 686 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 DHX37Q8IY37 1157 aaKnown RBP16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 PPP1R13LQ8WUF5 828 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 ZNF653Q96CK0 615 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 PBKQ96KB5 322 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 NLRP4Q96MN2 994 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 APOBEC3GQ9HC16 384 aaKnown RBP16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 C1orf112Q9NSG2 853 aa16.45■□□□□ 0.22
AC009961.1-203ENST00000607836 CXCL11O14625 94 aa16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 TXNP10599 105 aaKnown RBP16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 COMTP21964 271 aa16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 ERVK-9P63128 1117 aa16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 HLTFQ14527 1009 aaKnown RBP eCLIP16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 SCFD2Q8WU76 684 aa16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 NUP85Q9BW27 656 aa16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 ERVK-5Q9HDB9 667 aa16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 TMEM59LQ9UK28 342 aa16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 TRPC6Q9Y210 931 aa16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 RNF40O75150 1001 aa16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 RTN2O75298 545 aa16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 LMAN1P49257 510 aa16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 CLCN3P51790 818 aa16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 FAM160B1Q5W0V3 765 aa16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 ACTRT1Q8TDG2 376 aa16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 DDX1Q92499 740 aaKnown RBP16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 RNPC3Q96LT9 517 aaKnown RBP16.44■□□□□ 0.22
AC009961.1-203ENST00000607836 ZBTB42B2RXF5 422 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 TTI1O43156 1089 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 C4BPAP04003 597 aaKnown RBP16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 TNNC1P63316 161 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 PPIL2Q13356 520 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 ZACNQ401N2 412 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 CELF3Q5SZQ8 465 aaKnown RBP16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 IFT20Q8IY31 132 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 CEP120Q8N960 986 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 KCNH4Q9UQ05 1017 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 GOLGA6BA6NDN3 693 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 CLDN3O15551 220 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 B4GALT5O43286 388 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 ADCY3O60266 1144 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 GRIN3BO60391 1043 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 CST3P01034 146 aaPredicted RBP16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 CDR2Q01850 454 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 LAMTOR4Q0VGL1 99 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 PSMD6Q15008 389 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 ZNF394Q53GI3 561 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 TMEM270Q6UE05 265 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 USP37Q86T82 979 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 RNPEPQ9H4A4 650 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 GDF3Q9NR23 364 aa16.43■□□□□ 0.22
AC009961.1-203ENST00000607836 A0A0B4J269 797 aa16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 MAFO75444 373 aaPredicted RBP16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 EPHB4P54760 987 aa16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 WDR44Q5JSH3 913 aa16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 C15orf39Q6ZRI6 1047 aa16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 THNSL1Q8IYQ7 743 aa16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 ZNF564Q8TBZ8 553 aaPredicted RBP16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 SLC10A4Q96EP9 437 aa16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 TRIM51Q9BSJ1 452 aa16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 DPH5Q9H2P9 285 aa16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 FAM204AQ9H8W3 233 aa16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 NUB1Q9Y5A7 615 aa16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 PMM2O15305 246 aa16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 PLCB4Q15147 1175 aa16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 NEUROG2Q9H2A3 272 aa16.42■□□□□ 0.22
AC009961.1-203ENST00000607836 LOC285556D6RIA3 1793 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 INO80B-WBP1J3KQ70 363 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 SLC25A27O95847 323 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 TGFB3P10600 412 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 OSBPP22059 807 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 TMEM132AQ24JP5 1023 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 FMNL3Q8IVF7 1028 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 RHOT2Q8IXI1 618 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 CYFIP2Q96F07 1278 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 INO80BQ9C086 356 aaPredicted RBP16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 A0A0G2JMZ2 1700 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 DNAJC25-GNG10A0A024R161 153 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 TCRBV7S2A1N4TA0A589 114 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 H0YCG3 227 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 DAPK3O43293 454 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 GJB6O95452 261 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 CD58P19256 250 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 FLT3P36888 993 aa16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 GLE1Q53GS7 698 aaKnown RBP16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 DNAJC21Q5F1R6 531 aaKnown RBP16.41■□□□□ 0.22
AC009961.1-203ENST00000607836 USP50Q70EL3 339 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms