RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 PPARAQ07869 468 aa7.04□□□□□ -1.28
LINC00458-206ENST00000607494 TMEM240Q5SV17 173 aa7.04□□□□□ -1.28
LINC00458-206ENST00000607494 LMBR1LQ6UX01 489 aa7.04□□□□□ -1.28
LINC00458-206ENST00000607494 TPH2Q8IWU9 490 aa7.04□□□□□ -1.28
LINC00458-206ENST00000607494 CPA6Q8N4T0 437 aa7.04□□□□□ -1.28
LINC00458-206ENST00000607494 C1orf162Q8NEQ5 155 aaPredicted RBP7.04□□□□□ -1.28
LINC00458-206ENST00000607494 FAM193BQ96PV7 902 aaPredicted RBP7.04□□□□□ -1.28
LINC00458-206ENST00000607494 KCNH6Q9H252 994 aa7.04□□□□□ -1.28
LINC00458-206ENST00000607494 HDAC5Q9UQL6 1122 aa7.04□□□□□ -1.28
LINC00458-206ENST00000607494 VSTM5A8MXK1 200 aa7.03□□□□□ -1.28
LINC00458-206ENST00000607494 SEC24DO94855 1032 aaPredicted RBP7.03□□□□□ -1.28
LINC00458-206ENST00000607494 NUDT3O95989 172 aa7.03□□□□□ -1.28
LINC00458-206ENST00000607494 LMNAP02545 664 aaKnown RBP7.03□□□□□ -1.28
LINC00458-206ENST00000607494 RBP3P10745 1247 aa7.03□□□□□ -1.28
LINC00458-206ENST00000607494 KRT85P78386 507 aa7.03□□□□□ -1.28
LINC00458-206ENST00000607494 PCBP2Q15366 365 aaKnown RBP eCLIP7.03□□□□□ -1.28
LINC00458-206ENST00000607494 TERF2Q15554 542 aa7.03□□□□□ -1.28
LINC00458-206ENST00000607494 DDB1Q16531 1140 aa7.03□□□□□ -1.28
LINC00458-206ENST00000607494 GPR158Q5T848 1215 aa7.03□□□□□ -1.28
LINC00458-206ENST00000607494 TSHZ1Q6ZSZ6 1077 aa7.03□□□□□ -1.28
LINC00458-206ENST00000607494 LILRA3Q8N6C8 439 aaPredicted RBP7.03□□□□□ -1.28
LINC00458-206ENST00000607494 SVIPQ8NHG7 77 aa7.03□□□□□ -1.28
LINC00458-206ENST00000607494 FBXO41Q8TF61 875 aa7.03□□□□□ -1.28
LINC00458-206ENST00000607494 IL17RAQ96F46 866 aa7.03□□□□□ -1.28
LINC00458-206ENST00000607494 FAXDC2Q96IV6 333 aa7.03□□□□□ -1.28
LINC00458-206ENST00000607494 PRDM11Q9NQV5 511 aa7.03□□□□□ -1.28
LINC00458-206ENST00000607494 LEFTY2O00292 366 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 TRIM24O15164 1050 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 NRP2O60462 931 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 LDHAP00338 332 aaKnown RBP7.02□□□□□ -1.29
LINC00458-206ENST00000607494 PF4V1P10720 104 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 GYPEP15421 78 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 NRG3P56975 720 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 PHC1P78364 1004 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 DUSP2Q05923 314 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 VPS72Q15906 364 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 CSRP2Q16527 193 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 MINDY4Q4G0A6 757 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 TIGD2Q4W5G0 525 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 HECTD2Q5U5R9 776 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 BROXQ5VW32 411 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 CCDC62Q6P9F0 684 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 FRMD7Q6ZUT3 714 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 TAS1R1Q7RTX1 841 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 PNMA8AQ86V59 439 aaPredicted RBP7.02□□□□□ -1.29
LINC00458-206ENST00000607494 TEX101Q9BY14 249 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 C14orf119Q9NWQ9 140 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 TRPM5Q9NZQ8 1165 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 ANKFY1Q9P2R3 1169 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 KCNG1Q9UIX4 513 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 PPP2R3BQ9Y5P8 575 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 PCSK5Q92824 1860 aa7.02□□□□□ -1.29
LINC00458-206ENST00000607494 CREB3O43889 395 aa7.01□□□□□ -1.29
LINC00458-206ENST00000607494 KDM1AO60341 852 aa7.01□□□□□ -1.29
LINC00458-206ENST00000607494 CYP2C19P33261 490 aa7.01□□□□□ -1.29
LINC00458-206ENST00000607494 MRPL49Q13405 166 aaKnown RBP7.01□□□□□ -1.29
LINC00458-206ENST00000607494 UBE3CQ15386 1083 aa7.01□□□□□ -1.29
LINC00458-206ENST00000607494 PGM2L1Q6PCE3 622 aa7.01□□□□□ -1.29
LINC00458-206ENST00000607494 FAM83AQ86UY5 434 aa7.01□□□□□ -1.29
LINC00458-206ENST00000607494 NDC1Q9BTX1 674 aa7.01□□□□□ -1.29
LINC00458-206ENST00000607494 PRDM12Q9H4Q4 367 aa7.01□□□□□ -1.29
LINC00458-206ENST00000607494 PACSIN3Q9UKS6 424 aa7.01□□□□□ -1.29
LINC00458-206ENST00000607494 NOC2LQ9Y3T9 749 aaKnown RBP7.01□□□□□ -1.29
LINC00458-206ENST00000607494 TNFRSF18Q9Y5U5 241 aa7.01□□□□□ -1.29
LINC00458-206ENST00000607494 PRAMEF4O60810 478 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 NCR1O76036 304 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 RECQL4O94761 1208 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 TRIM27P14373 513 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 LAG3P18627 525 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 GPR15P49685 360 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 GZMKP49863 264 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 GTF2H3Q13889 308 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 LONRF3Q496Y0 759 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 RASSF3Q86WH2 238 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 SYT12Q8IV01 421 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 GLB1L3Q8NCI6 653 aaPredicted RBP7□□□□□ -1.29
LINC00458-206ENST00000607494 MKS1Q9NXB0 559 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 ZNHIT2Q9UHR6 403 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 EVLQ9UI08 416 aaPredicted RBP7□□□□□ -1.29
LINC00458-206ENST00000607494 PRSS50Q9UI38 385 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 MRFAP1Q9Y605 127 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 NUMBLQ9Y6R0 609 aa7□□□□□ -1.29
LINC00458-206ENST00000607494 A0A1W2PR48 441 aa6.99□□□□□ -1.29
LINC00458-206ENST00000607494 TRIM75PA6NK02 468 aa6.99□□□□□ -1.29
LINC00458-206ENST00000607494 LPLP06858 475 aa6.99□□□□□ -1.29
LINC00458-206ENST00000607494 VCAM1P19320 739 aa6.99□□□□□ -1.29
LINC00458-206ENST00000607494 IL12RB1P42701 662 aa6.99□□□□□ -1.29
LINC00458-206ENST00000607494 MANFP55145 182 aaKnown RBP6.99□□□□□ -1.29
LINC00458-206ENST00000607494 TRIM25Q14258 630 aaKnown RBP6.99□□□□□ -1.29
LINC00458-206ENST00000607494 ANKS6Q68DC2 871 aa6.99□□□□□ -1.29
LINC00458-206ENST00000607494 Q6YL49 198 aa6.99□□□□□ -1.29
LINC00458-206ENST00000607494 EPM2AIP1Q7L775 607 aaPredicted RBP6.99□□□□□ -1.29
LINC00458-206ENST00000607494 CMTR2Q8IYT2 770 aaKnown RBP6.99□□□□□ -1.29
LINC00458-206ENST00000607494 VOPP1Q96AW1 172 aa6.99□□□□□ -1.29
LINC00458-206ENST00000607494 NUP88Q99567 741 aaPredicted RBP6.99□□□□□ -1.29
LINC00458-206ENST00000607494 PDCD2LQ9BRP1 358 aa6.99□□□□□ -1.29
LINC00458-206ENST00000607494 SPON1Q9HCB6 807 aa6.99□□□□□ -1.29
LINC00458-206ENST00000607494 TMPRSS11EQ9UL52 423 aa6.99□□□□□ -1.29
LINC00458-206ENST00000607494 ZBTB21Q9ULJ3 1066 aa6.99□□□□□ -1.29
LINC00458-206ENST00000607494 ZMYM3Q14202 1370 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms