RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 PPP1R3GB7ZBB8 358 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 PROB1E7EW31 1015 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 RPS6KA5O75582 802 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 ERLIN2O94905 339 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 PIGRP01833 764 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 ZNF445P59923 1031 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 SNRPFP62306 86 aaKnown RBP11.31□□□□□ -0.6
LINC01954-201ENST00000607419 FOXK2Q01167 660 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 NCBP1Q09161 790 aaKnown RBP11.31□□□□□ -0.6
LINC01954-201ENST00000607419 PRPF4BQ13523 1007 aaKnown RBP11.31□□□□□ -0.6
LINC01954-201ENST00000607419 KNOP1Q1ED39 458 aaKnown RBP11.31□□□□□ -0.6
LINC01954-201ENST00000607419 DPCR1Q3MIW9 517 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 FBXO47Q5MNV8 452 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 LRSAM1Q6UWE0 723 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 ZPBP2Q6X784 338 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 FAM43BQ6ZT52 329 aaPredicted RBP11.31□□□□□ -0.6
LINC01954-201ENST00000607419 TAS1R3Q7RTX0 852 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 CATSPER4Q7RTX7 472 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 SYCP3Q8IZU3 236 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 TMEM40Q8WWA1 233 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 ZNF689Q96CS4 500 aaPredicted RBP11.31□□□□□ -0.6
LINC01954-201ENST00000607419 MRPL4Q9BYD3 311 aaKnown RBP11.31□□□□□ -0.6
LINC01954-201ENST00000607419 MAPK8IP1Q9UQF2 711 aa11.31□□□□□ -0.6
LINC01954-201ENST00000607419 NOC2LQ9Y3T9 749 aaKnown RBP11.31□□□□□ -0.6
LINC01954-201ENST00000607419 FRYLO94915 3013 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 PDXKO00764 312 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 GPR182O15218 404 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 NCK2O43639 380 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 CAVIN2O95810 425 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 CCNE1P24864 410 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 ERCC5P28715 1186 aaPredicted RBP11.3□□□□□ -0.6
LINC01954-201ENST00000607419 AXLP30530 894 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 HOXD13P35453 343 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 SIGLEC14Q08ET2 396 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 KCNA1Q09470 495 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 LPIN1Q14693 890 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 AMHR2Q16671 573 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 CENPPQ6IPU0 288 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 FOXR2Q6PJQ5 311 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 TSHZ1Q6ZSZ6 1077 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 HS2ST1Q7LGA3 356 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 FAM228AQ86W67 206 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 SUGP1Q8IWZ8 645 aaKnown RBP11.3□□□□□ -0.6
LINC01954-201ENST00000607419 NELFCDQ8IXH7 590 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 FIBCD1Q8N539 461 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 SMRP1Q8NCR6 262 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 GOLGA5Q8TBA6 731 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 CLP1Q92989 425 aaKnown RBP11.3□□□□□ -0.6
LINC01954-201ENST00000607419 P2RX5Q93086 422 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 BICD1Q96G01 975 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 POP1Q99575 1024 aaKnown RBP11.3□□□□□ -0.6
LINC01954-201ENST00000607419 PRRX2Q99811 253 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 IFIH1Q9BYX4 1025 aaKnown RBP11.3□□□□□ -0.6
LINC01954-201ENST00000607419 NAT10Q9H0A0 1025 aaKnown RBP11.3□□□□□ -0.6
LINC01954-201ENST00000607419 GBP3Q9H0R5 595 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 KCTD10Q9H3F6 313 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 TYW1Q9NV66 732 aaKnown RBP11.3□□□□□ -0.6
LINC01954-201ENST00000607419 CGNQ9P2M7 1197 aaKnown RBP11.3□□□□□ -0.6
LINC01954-201ENST00000607419 BARX2Q9UMQ3 279 aaPredicted RBP11.3□□□□□ -0.6
LINC01954-201ENST00000607419 PLAGL2Q9UPG8 496 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 CNTNAP2Q9UHC6 1331 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 CACNA1HO95180 2353 aa11.3□□□□□ -0.6
LINC01954-201ENST00000607419 ZMYM2Q9UBW7 1377 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 BICDL2A1A5D9 508 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 PRR23AA6NEV1 266 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 HNRNPDLO14979 420 aaKnown RBP11.29□□□□□ -0.6
LINC01954-201ENST00000607419 CALUO43852 315 aaPredicted RBP11.29□□□□□ -0.6
LINC01954-201ENST00000607419 TSPAN1O60635 241 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 CSDE1O75534 798 aaKnown RBP11.29□□□□□ -0.6
LINC01954-201ENST00000607419 ITGB1P05556 798 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 RB1P06400 928 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 GHRP10912 638 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 FGFR4P22455 802 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 LIG4P49917 911 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 LRRC63Q05C16 580 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 PAK1Q13153 545 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 PAK2Q13177 524 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 TMEM132AQ24JP5 1023 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 ANO6Q4KMQ2 910 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 SLFN12LQ6IEE8 588 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 KLHL10Q6JEL2 608 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 RBM23Q86U06 439 aaKnown RBP11.29□□□□□ -0.6
LINC01954-201ENST00000607419 RTN4RL1Q86UN2 441 aaPredicted RBP11.29□□□□□ -0.6
LINC01954-201ENST00000607419 VN1R2Q8NFZ6 395 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 SPPL3Q8TCT6 385 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 NELFBQ8WX92 580 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 RPGRIP1Q96KN7 1286 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 ACO2Q99798 780 aaKnown RBP11.29□□□□□ -0.6
LINC01954-201ENST00000607419 TSG101Q99816 390 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 TARS2Q9BW92 718 aaKnown RBP11.29□□□□□ -0.6
LINC01954-201ENST00000607419 DNAJC25Q9H1X3 360 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 SMOC2Q9H3U7 446 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 AGO3Q9H9G7 860 aaKnown RBP11.29□□□□□ -0.6
LINC01954-201ENST00000607419 ERVK-5Q9HDB9 667 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 CHST12Q9NRB3 414 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 AGPAT5Q9NUQ2 364 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 RWDD2AQ9UIY3 292 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 PADI3Q9ULW8 664 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 ST3GAL5Q9UNP4 418 aa11.29□□□□□ -0.6
LINC01954-201ENST00000607419 CTNND2Q9UQB3 1225 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms