RNA–Protein interactions for RNA: ENST00000604859.1

NEK4P3-201, Transcript of NIMA-related kinase 4 pseudogene 3, humanhuman

BASIC

Gene NEK4P3, Length 544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P3-201ENST00000604859 NTHL1P78549 312 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 ELAVL2Q12926 359 aaKnown RBP14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 PRPF4BQ13523 1007 aaKnown RBP14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 TRIM29Q14134 588 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 NAB2Q15742 525 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 MAPK6Q16659 721 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 ME3Q16798 604 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 TMEM132AQ24JP5 1023 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 UVSSAQ2YD98 709 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 PDXDC1Q6P996 788 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 ZC3H14Q6PJT7 736 aaKnown RBP14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 PJA1Q8NG27 643 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 FGF13Q92913 245 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 ADPGKQ9BRR6 497 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 CXCL16Q9H2A7 254 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 TMEM60Q9H2L4 133 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 PDZD7Q9H5P4 517 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 POLIQ9UNA4 740 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 DNAH14Q0VDD8 3507 aa14.18□□□□□ -0.14
NEK4P3-201ENST00000604859 NOTCH4Q99466 2003 aa14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 ZNF292O60281 2723 aa14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 ACKR2O00590 384 aa14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 CCL16O15467 120 aa14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 ADAM12O43184 909 aa14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 XYLBO75191 536 aa14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 MED24O75448 989 aa14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 RECQL4O94761 1208 aa14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 GLULP15104 373 aa14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 MTSS1LQ765P7 747 aa14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 NOSTRINQ8IVI9 506 aa14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 NSUN7Q8NE18 718 aaKnown RBP14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 GTF3C6Q969F1 213 aa14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 POLR3CQ9BUI4 534 aaPredicted RBP14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 FOXQ1Q9C009 403 aa14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 DAXXQ9UER7 740 aaPredicted RBP14.17□□□□□ -0.14
NEK4P3-201ENST00000604859 KANSL1LA0AUZ9 987 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 LARGE1O95461 756 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 PRKCBP05771 671 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 CYP11B2P19099 503 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 MCM7P33993 719 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 OR1D2P34982 312 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 NAMPTP43490 491 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 SNW1Q13573 536 aaKnown RBP14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 RAB33AQ14088 237 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 SLC44A4Q53GD3 710 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 AXDND1Q5T1B0 1012 aaPredicted RBP14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 PADI6Q6TGC4 694 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 ITFG1Q8TB96 612 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 SLC7A14Q8TBB6 771 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 BSNDQ8WZ55 320 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 CCDC113Q9H0I3 377 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 USP20Q9Y2K6 914 aa14.16□□□□□ -0.14
NEK4P3-201ENST00000604859 ARHGEF35A5YM69 484 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 JAK2O60674 1132 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 LRRN2O75325 713 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 B3GAT3O94766 335 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 POU2F2P09086 479 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 LIG1P18858 919 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 FGFR3P22607 806 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 RPA1P27694 616 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 RBM25P49756 843 aaKnown RBP14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 FOSBP53539 338 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 PRKCQQ04759 706 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 RTL10Q7L3V2 364 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 KIAA2013Q8IYS2 634 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 ERMNQ8TAM6 284 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 DEPTORQ8TB45 409 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 DDX23Q9BUQ8 820 aaKnown RBP14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 HCFC1R1Q9NWW0 138 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 GDAQ9Y2T3 454 aa14.15□□□□□ -0.14
NEK4P3-201ENST00000604859 DMXL1Q9Y485 3027 aa14.15□□□□□ -0.15
NEK4P3-201ENST00000604859 TMEM189-UBE2V1I3L0A0 370 aa14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 EDN1P05305 212 aa14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 IGFBP6P24592 240 aaPredicted RBP14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 PFKPQ01813 784 aa14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 PPP2R5AQ15172 486 aa14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 MLF2Q15773 248 aaPredicted RBP14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 DCAF4L1Q3SXM0 396 aa14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 PABPC1LQ4VXU2 614 aaKnown RBP14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 EEF1DP3Q658K8 133 aa14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 MAML2Q8IZL2 1156 aaPredicted RBP14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 RUBCNQ92622 972 aa14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 RMDN1Q96DB5 314 aa14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 PPP1R10Q96QC0 940 aaKnown RBP14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 HINFPQ9BQA5 517 aa14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 BCO2Q9BYV7 579 aa14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 OSBPL6Q9BZF3 934 aa14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 DNMT3BQ9UBC3 853 aaKnown RBP14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 MTRRQ9UBK8 725 aa14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 KCNH3Q9ULD8 1083 aa14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 MTF2Q9Y483 593 aaPredicted RBP14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 FRYLO94915 3013 aa14.14□□□□□ -0.15
NEK4P3-201ENST00000604859 OTOGLQ3ZCN5 2332 aa14.13□□□□□ -0.15
NEK4P3-201ENST00000604859 FAM170BA6NMN3 283 aa14.13□□□□□ -0.15
NEK4P3-201ENST00000604859 TRAPPC3O43617 180 aa14.13□□□□□ -0.15
NEK4P3-201ENST00000604859 MUTP22033 750 aa14.13□□□□□ -0.15
NEK4P3-201ENST00000604859 CLCNKBP51801 687 aa14.13□□□□□ -0.15
NEK4P3-201ENST00000604859 EFNA5P52803 228 aa14.13□□□□□ -0.15
NEK4P3-201ENST00000604859 SAFBQ15424 915 aaKnown RBP eCLIP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms