RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 MRPL38Q96DV4 380 aaKnown RBP17.46■□□□□ 0.39
PPFIA3-213ENST00000602905 SNX27Q96L92 541 aa17.46■□□□□ 0.39
PPFIA3-213ENST00000602905 COLEC11Q9BWP8 271 aa17.46■□□□□ 0.39
PPFIA3-213ENST00000602905 PLEKHA5Q9HAU0 1116 aa17.46■□□□□ 0.39
PPFIA3-213ENST00000602905 DNAJB4Q9UDY4 337 aa17.46■□□□□ 0.39
PPFIA3-213ENST00000602905 STK39Q9UEW8 545 aa17.46■□□□□ 0.39
PPFIA3-213ENST00000602905 STYXL1Q9Y6J8 313 aa17.46■□□□□ 0.39
PPFIA3-213ENST00000602905 NT5C1B-RDH14C9J2C7 533 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 GRM6O15303 877 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 RHOBTB3O94955 611 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 PBX3P40426 434 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 SLC11A1P49279 550 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 SNRPFP62306 86 aaKnown RBP17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 HSP90AA2PQ14568 343 aaPredicted RBP17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 KCNB1Q14721 858 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 SEZ6Q53EL9 994 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 TIGD5Q53EQ6 642 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 EPM2AIP1Q7L775 607 aaPredicted RBP17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 CD302Q8IX05 232 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 NELFCDQ8IXH7 590 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 ELOA2Q8IYF1 753 aaPredicted RBP17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 GLIS3Q8NEA6 775 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 GSTCDQ8NEC7 633 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 PPP2R3CQ969Q6 453 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 HAPLN2Q9GZV7 340 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 LZTS1Q9Y250 596 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 MTCH2Q9Y6C9 303 aa17.45■□□□□ 0.38
PPFIA3-213ENST00000602905 MYO7AQ13402 2215 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 TRANK1O15050 2925 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 PTGESO14684 152 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 NRP1O14786 923 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 XPOTO43592 962 aaKnown RBP17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 CXCL8P10145 99 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 DSC1Q08554 894 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 PNOCQ13519 176 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 GLRA4Q5JXX5 417 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 PDE12Q6L8Q7 609 aaKnown RBP17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 GOLGA5Q8TBA6 731 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 MICAL1Q8TDZ2 1067 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 NOC3LQ8WTT2 800 aaKnown RBP17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 SCFD1Q8WVM8 642 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 SMARCE1Q969G3 411 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 FAM212AQ96EL1 285 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 IGSF21Q96ID5 467 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 GSDMAQ96QA5 445 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 TSPAN18Q96SJ8 248 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 GTPBP4Q9BZE4 634 aaKnown RBP17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 TLR9Q9NR96 1032 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 CNTN3Q9P232 1028 aa17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 CGNQ9P2M7 1197 aaKnown RBP17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 PRG3Q9Y2Y8 225 aaPredicted RBP17.44■□□□□ 0.38
PPFIA3-213ENST00000602905 SMIM28A0A1B0GU29 152 aa17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 TISP43B9A030 160 aa17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 TULP1O00294 542 aaPredicted RBP17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 CSPG5O95196 566 aa17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 KCNE1P15382 129 aa17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 TNFSF9P41273 254 aa17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 ACOT2P49753 483 aa17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 POU5F1Q01860 360 aaKnown RBP17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 STK4Q13043 487 aa17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 KNOP1Q1ED39 458 aaKnown RBP17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 BMT2Q1RMZ1 405 aa17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 SLC10A6Q3KNW5 377 aa17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 XKR4Q5GH76 650 aa17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 ALKAL1Q6UXT8 129 aa17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 MAFAQ8NHW3 353 aaPredicted RBP17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 PPM1EQ8WY54 764 aa17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 UROC1Q96N76 676 aa17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 CPSF3Q9UKF6 684 aaKnown RBP17.43■□□□□ 0.38
PPFIA3-213ENST00000602905 ANK1P16157 1881 aa17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 CASTOR2A6NHX0 329 aa17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 TADA2AO75478 443 aa17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 ADSSP30520 456 aa17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 TMC7Q7Z402 723 aa17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 DDX53Q86TM3 631 aaKnown RBP17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 KIAA0895Q8NCT3 520 aa17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 KIF12Q96FN5 646 aa17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 DDX27Q96GQ7 796 aaKnown RBP17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 PPP1R10Q96QC0 940 aaKnown RBP17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 FAM213AQ9BRX8 229 aa17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 IKZF4Q9H2S9 585 aa17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 PCIF1Q9H4Z3 704 aa17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 NSUN3Q9H649 340 aaKnown RBP17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 KIAA1586Q9HCI6 787 aa17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 ENTPD7Q9NQZ7 604 aa17.42■□□□□ 0.38
PPFIA3-213ENST00000602905 TTC26A0AVF1 554 aa17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 LACTBL1A8MY62 500 aa17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 EXTL3O43909 919 aa17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 FAM189A1O60320 539 aa17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 B4GALT3O60512 393 aa17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 IL18RAPO95256 599 aa17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 CA8P35219 290 aa17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 CCDC85BQ15834 202 aaPredicted RBP17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 ENOX2Q16206 610 aaKnown RBP17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 ZBTB41Q5SVQ8 909 aa17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 GPD1LQ8N335 351 aa17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 SAAL1Q96ER3 474 aa17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 CBWD1Q9BRT8 395 aa17.41■□□□□ 0.38
PPFIA3-213ENST00000602905 ASB7Q9H672 318 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms