RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 TSSK1BQ9BXA7 367 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 SLITRK6Q9H5Y7 841 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 CEP72Q9P209 647 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 MCAMP43121 646 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 CDK8P49336 464 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 SUGT1Q9Y2Z0 365 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 DNALI1O14645 258 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-216ENST00000602557 KRT16P08779 473 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 ZNF746Q6NUN9 644 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-216ENST00000602557 MTBPQ96DY7 904 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 SH3GLB2Q9NR46 395 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 LMCD1Q9NZU5 365 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 KLHL8Q9P2G9 620 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-216ENST00000602557 LIFRP42702 1097 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 GCLMP48507 274 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 CCNHP51946 323 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-216ENST00000602557 ZNF483Q8TF39 744 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-216ENST00000602557 RBM12Q9NTZ6 932 aaKnown RBP9.17□□□□□ -0.94
CSMD1-216ENST00000602557 AMACRQ9UHK6 382 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 TSR3Q9UJK0 312 aaKnown RBP9.17□□□□□ -0.94
CSMD1-216ENST00000602557 DNAJC12Q9UKB3 198 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 CEP170Q5SW79 1584 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 CCDC22O60826 627 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 CALB1P05937 261 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 ZBED8Q8IZ13 594 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 LRRN4CLQ8ND94 238 aa9.17□□□□□ -0.94
CSMD1-216ENST00000602557 E2F8A0AVK6 867 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 MYCP01106 439 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 INPP5AQ14642 412 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 SLC27A3Q5K4L6 730 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 LRRC8BQ6P9F7 803 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 HAO1Q9UJM8 370 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 TMEM191CA6NGB0 347 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 KRT38O76015 456 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 OCM2P0CE71 109 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 OCMP0CE72 109 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 SMARCA1P28370 1054 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 CIITAP33076 1130 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 CLK1P49759 484 aaKnown RBP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 AGBL1Q96MI9 1066 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 GPR108Q9NPR9 543 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 ANO9A1A5B4 782 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 TMEM247A6NEH6 219 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 SNX2O60749 519 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 ENO3P13929 434 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 MTTPP55157 894 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 KRT33BQ14525 404 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 CCNI2Q6ZMN8 369 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 C4orf33Q8N1A6 199 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 ZKSCAN4Q969J2 545 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 PHF21AQ96BD5 680 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 OTULINQ96BN8 352 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 MRPL40Q9NQ50 206 aaKnown RBP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 HERC5Q9UII4 1024 aaKnown RBP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 K7ERI5 159 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 NMT2O60551 498 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 AARSP49588 968 aaKnown RBP eCLIP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 PEX3P56589 373 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 PDCD6IPQ8WUM4 868 aaKnown RBP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 ATXN7L3BQ96GX2 97 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 CROCCQ5TZA2 2017 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 DISP1Q96F81 1524 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 CYP2D6P10635 497 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 OR8H2Q8N162 312 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 SH3RF3Q8TEJ3 882 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 CCDC134Q9H6E4 229 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 GSTT1P30711 240 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 GRIN1Q05586 938 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 COASYQ13057 564 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 TBC1D9BQ66K14 1250 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 PIH1D3Q9NQM4 214 aaKnown RBP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 LCA5LO95447 670 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 ARMCX2Q7L311 632 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 BNIPLQ7Z465 357 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 C3orf20Q8ND61 904 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 PITPNM2Q9BZ72 1349 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 PLEKHG3A1L390 1219 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 ORC4O43929 436 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 MAPK10P53779 464 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 STX3Q13277 289 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 ZNF394Q53GI3 561 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 LVRNQ6Q4G3 990 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 NSL1Q96IY1 281 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 SHCBP1LQ9BZQ2 653 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 IL1RL2Q9HB29 575 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 PARVBQ9HBI1 364 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 ZMYND8Q9ULU4 1186 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 HECW2Q9P2P5 1572 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 OSBPP22059 807 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 PDIA2Q13087 525 aaKnown RBP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 UNC13DQ70J99 1090 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 GRAMD1AQ96CP6 724 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 SNF8Q96H20 258 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 PI4KBQ9UBF8 816 aa9.16□□□□□ -0.94
CSMD1-216ENST00000602557 CNOT8Q9UFF9 292 aaKnown RBP9.16□□□□□ -0.94
CSMD1-216ENST00000602557 TMEM120BA0PK00 339 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 PECAM1P16284 738 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-216ENST00000602557 PRCPP42785 496 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 SNX30Q5VWJ9 437 aa9.15□□□□□ -0.94
CSMD1-216ENST00000602557 RBM41Q96IZ5 413 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms