RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-206	ENST00000602307	NPEPPS	P55786	919 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	MDM2	Q00987	491 aa	Predicted RBP	12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	ANGPTL8	Q6UXH0	198 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	MMS22L	Q6ZRQ5	1243 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	C18orf8	Q96DM3	657 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	KAZALD1	Q96I82	304 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	BTBD6	Q96KE9	485 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	ACAP3	Q96P50	834 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	GCNA	Q96QF7	691 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	FAM118B	Q9BPY3	351 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	ANGPTL2	Q9UKU9	493 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	TMEM259	Q4ZIN3	620 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	EPC2	Q52LR7	807 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	AGR3	Q8TD06	166 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	AGBL1	Q96MI9	1066 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	DDX56	Q9NY93	547 aa	Known RBP	12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	DONSON	Q9NYP3	566 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	HACD3	Q9P035	362 aa		12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	TSR3	Q9UJK0	312 aa	Known RBP	12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	PIN4	Q9Y237	131 aa	Known RBP	12.79	□□□□□ -0.36
PTPN23-206	ENST00000602307	ATP9B	O43861	1147 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	RARB	P10826	455 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	SMARCA1	P28370	1054 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	EIF3E	P60228	445 aa	Known RBP	12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	MTM1	Q13496	603 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	DHX34	Q14147	1143 aa	Known RBP	12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	NUDCD3	Q8IVD9	361 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	GANC	Q8TET4	914 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	UPF3A	Q9H1J1	476 aa	Known RBP	12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	SUN2	Q9UH99	717 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	GGT7	Q9UJ14	662 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	ORC6	Q9Y5N6	252 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	ENTPD3	O75355	529 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	HAUS5	O94927	633 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	TYK2	P29597	1187 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	SESN2	P58004	480 aa	Predicted RBP	12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	NCOA4	Q13772	614 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	KIAA1755	Q5JYT7	1200 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	ATL2	Q8NHH9	583 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	RNF217	Q8TC41	542 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	SCG3	Q8WXD2	468 aa	Known RBP	12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	TMEM117	Q9H0C3	514 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	SLC8A2	Q9UPR5	921 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	PDS5A	Q29RF7	1337 aa	Known RBP	12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	TBX3	O15119	743 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	APOE	P02649	317 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	ARFIP2	P53365	341 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	POLE2	P56282	527 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	ESRRG	P62508	458 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	DRP2	Q13474	957 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	C9orf72	Q96LT7	481 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	ETNK1	Q9HBU6	452 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	RBM12	Q9NTZ6	932 aa	Known RBP	12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	ASB14	A6NK59	587 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	KPNA7	A9QM74	516 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	ATMIN	O43313	823 aa	Predicted RBP	12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	TMEM62	Q0P6H9	643 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	ICE2	Q659A1	982 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	ZNF280C	Q8ND82	737 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	LPAR1	Q92633	364 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	FGFR1OP2	Q9NVK5	253 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	LCMT1	Q9UIC8	334 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	SPATA31A1	Q5TZJ5	1347 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	ITIH6	Q6UXX5	1313 aa		12.78	□□□□□ -0.36
PTPN23-206	ENST00000602307	TARSL2	A2RTX5	802 aa	Known RBP	12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	PDGFRA	P16234	1089 aa		12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	ACTN3	Q08043	901 aa	Predicted RBP	12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	KCNV2	Q8TDN2	545 aa		12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	AGAP3	Q96P47	875 aa		12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	CFAP69	A5D8W1	941 aa		12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	PPARG	P37231	505 aa	Predicted RBP	12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	RECQL	P46063	649 aa	Predicted RBP	12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	HIF1A	Q16665	826 aa		12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	ZBTB41	Q5SVQ8	909 aa		12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	ANGEL2	Q5VTE6	544 aa	Known RBP	12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	GJB7	Q6PEY0	223 aa		12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	FRA10AC1	Q70Z53	315 aa		12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	SEPT1	Q8WYJ6	367 aa		12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	XAB2	Q9HCS7	855 aa	Known RBP	12.77	□□□□□ -0.36
PTPN23-206	ENST00000602307	AK9	Q5TCS8	1911 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	GPR75-ASB3	A0A0A6YYF3	556 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	PPP1R3G	B7ZBB8	358 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	PSMD14	O00487	310 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	DYNC1LI2	O43237	492 aa	Predicted RBP	12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	GRAP2	O75791	330 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	ERF	P50548	548 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	AP3M2	P53677	418 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	EDRF1	Q3B7T1	1238 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	CDKL3	Q8IVW4	592 aa	Predicted RBP	12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	REXO1L1P	Q8IX06	675 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	OR2W6P	Q8NHA6	318 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	N4BP2L2	Q92802	583 aa	Predicted RBP	12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	PI4K2A	Q9BTU6	479 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	FBXO28	Q9NVF7	368 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	NOP53	Q9NZM5	478 aa	Known RBP	12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	HPCAL4	Q9UM19	191 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	SNX2	O60749	519 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	PDGFRB	P09619	1106 aa		12.77	□□□□□ -0.37
PTPN23-206	ENST00000602307	RPA1	P27694	616 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms