RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 CDR2LQ86X02 465 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 B3GALT6Q96L58 329 aa19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 CLSTN3Q9BQT9 956 aa19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 RAB34Q9BZG1 259 aa19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 PPP4R2Q9NY27 417 aa19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 SNTG2Q9NY99 539 aa19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 FBXW11Q9UKB1 542 aa19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 CA14Q9ULX7 337 aa19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 EP300Q09472 2414 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-227ENST00000602011 PTGESO14684 152 aa19.63■□□□□ 0.73
SHKBP1-227ENST00000602011 RECQL4O94761 1208 aa19.63■□□□□ 0.73
SHKBP1-227ENST00000602011 LARGE1O95461 756 aa19.63■□□□□ 0.73
SHKBP1-227ENST00000602011 RAB33AQ14088 237 aa19.63■□□□□ 0.73
SHKBP1-227ENST00000602011 PSMD5Q16401 504 aa19.63■□□□□ 0.73
SHKBP1-227ENST00000602011 RTP2Q5QGT7 225 aa19.63■□□□□ 0.73
SHKBP1-227ENST00000602011 PPM1LQ5SGD2 360 aa19.63■□□□□ 0.73
SHKBP1-227ENST00000602011 MTSS1LQ765P7 747 aa19.63■□□□□ 0.73
SHKBP1-227ENST00000602011 ZSCAN31Q96LW9 406 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-227ENST00000602011 CCDC113Q9H0I3 377 aa19.63■□□□□ 0.73
SHKBP1-227ENST00000602011 CDH7Q9ULB5 785 aa19.63■□□□□ 0.73
SHKBP1-227ENST00000602011 NOL7Q9UMY1 257 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-227ENST00000602011 A0A087WWV3 80 aa19.62■□□□□ 0.73
SHKBP1-227ENST00000602011 WNT7AO00755 349 aa19.62■□□□□ 0.73
SHKBP1-227ENST00000602011 ID4P47928 161 aa19.62■□□□□ 0.73
SHKBP1-227ENST00000602011 FXR2P51116 673 aaKnown RBP eCLIP19.62■□□□□ 0.73
SHKBP1-227ENST00000602011 HTR4Q13639 388 aa19.62■□□□□ 0.73
SHKBP1-227ENST00000602011 POTEGQ6S5H5 508 aa19.62■□□□□ 0.73
SHKBP1-227ENST00000602011 CEP57Q86XR8 500 aa19.62■□□□□ 0.73
SHKBP1-227ENST00000602011 FBXO18Q8NFZ0 1043 aa19.62■□□□□ 0.73
SHKBP1-227ENST00000602011 DDX27Q96GQ7 796 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-227ENST00000602011 KCNH3Q9ULD8 1083 aa19.62■□□□□ 0.73
SHKBP1-227ENST00000602011 R4GN57 208 aa19.62■□□□□ 0.73
SHKBP1-227ENST00000602011 CASTOR2A6NHX0 329 aa19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 K7ERI5 159 aa19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 KIF4AO95239 1232 aa19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 C8AP07357 584 aa19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 RPL17P18621 184 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 GNL2Q13823 731 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 ZNF174Q15697 407 aa19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 NAB2Q15742 525 aa19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 PRSS55Q6UWB4 352 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 GET4Q7L5D6 327 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 GLYCTKQ8IVS8 523 aa19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 KCTD17Q8N5Z5 321 aa19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 RABGGTAQ92696 567 aa19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 C17orf75Q9HAS0 396 aa19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 TOPORSQ9NS56 1045 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 SIT1Q9Y3P8 196 aa19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 RBM19Q9Y4C8 960 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 BACE2Q9Y5Z0 518 aa19.61■□□□□ 0.73
SHKBP1-227ENST00000602011 ARID2Q68CP9 1835 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 DOCK8Q8NF50 2099 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 LAD1O00515 517 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 B3GAT3O94766 335 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 FGFR3P22607 806 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 YARSP54577 528 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 PFKPQ01813 784 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 SPECC1Q5M775 1068 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 TTC38Q5R3I4 469 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 ATF7IP2Q5U623 682 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 ANKS3Q6ZW76 656 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 GRASPQ7Z6J2 395 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 NOSTRINQ8IVI9 506 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 KCNG4Q8TDN1 519 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 PAAF1Q9BRP4 392 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 TMEM134Q9H6X4 195 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 TBC1D17Q9HA65 648 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 ARHGEF3Q9NR81 526 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 SH2B1Q9NRF2 756 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 SLC38A7Q9NVC3 462 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 LRWD1Q9UFC0 647 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 TNFSF13BQ9Y275 285 aa19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 TDRD15B5MCY1 1934 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-227ENST00000602011 MTCL1Q9Y4B5 1905 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 ZNF292O60281 2723 aa19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 DCNP07585 359 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 CCT6AP40227 531 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 STARD6P59095 220 aa19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 AXDND1Q5T1B0 1012 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 ZC3H14Q6PJT7 736 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 RSPO2Q6UXX9 243 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 FAM184AQ8NB25 1140 aa19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 GPR152Q8TDT2 470 aa19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 BSNDQ8WZ55 320 aa19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 PPP1R10Q96QC0 940 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 CCDC94Q9BW85 323 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 MTRRQ9UBK8 725 aa19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 CACNG4Q9UBN1 327 aa19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 DNM3Q9UQ16 869 aa19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 NUMBLQ9Y6R0 609 aa19.59■□□□□ 0.73
SHKBP1-227ENST00000602011 DMXL1Q9Y485 3027 aa19.58■□□□□ 0.73
SHKBP1-227ENST00000602011 OR1D2P34982 312 aa19.58■□□□□ 0.72
SHKBP1-227ENST00000602011 FOSBP53539 338 aa19.58■□□□□ 0.72
SHKBP1-227ENST00000602011 PRKCQQ04759 706 aa19.58■□□□□ 0.72
SHKBP1-227ENST00000602011 UPP1Q16831 310 aa19.58■□□□□ 0.72
SHKBP1-227ENST00000602011 TIPINQ9BVW5 301 aa19.58■□□□□ 0.72
SHKBP1-227ENST00000602011 OSBPL6Q9BZF3 934 aa19.58■□□□□ 0.72
SHKBP1-227ENST00000602011 BHMT2Q9H2M3 363 aa19.58■□□□□ 0.72
SHKBP1-227ENST00000602011 AVENQ9NQS1 362 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-227ENST00000602011 KIAA1024Q9UPX6 916 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms