RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 COL16A1Q07092 1604 aaPredicted RBP11.78□□□□□ -0.52
ZNF558-207ENST00000601372 YWHAGP61981 247 aaKnown RBP eCLIP11.77□□□□□ -0.52
ZNF558-207ENST00000601372 ZNF484Q5JVG2 852 aa11.77□□□□□ -0.52
ZNF558-207ENST00000601372 RUNDC3BQ96NL0 473 aa11.77□□□□□ -0.52
ZNF558-207ENST00000601372 RAB3IPQ96QF0 476 aaPredicted RBP11.77□□□□□ -0.52
ZNF558-207ENST00000601372 ELAC2Q9BQ52 826 aaKnown RBP11.77□□□□□ -0.52
ZNF558-207ENST00000601372 VTA1Q9NP79 307 aa11.77□□□□□ -0.52
ZNF558-207ENST00000601372 KLK14Q9P0G3 267 aa11.77□□□□□ -0.52
ZNF558-207ENST00000601372 ANAPC7Q9UJX3 599 aa11.77□□□□□ -0.52
ZNF558-207ENST00000601372 SLC4A1P02730 911 aa11.77□□□□□ -0.52
ZNF558-207ENST00000601372 YBX3P16989 372 aaKnown RBP eCLIP11.77□□□□□ -0.52
ZNF558-207ENST00000601372 DUOXA2Q1HG44 320 aa11.77□□□□□ -0.52
ZNF558-207ENST00000601372 GJC2Q5T442 439 aaPredicted RBP11.77□□□□□ -0.52
ZNF558-207ENST00000601372 PPFIBP2Q8ND30 876 aa11.77□□□□□ -0.52
ZNF558-207ENST00000601372 AGO4Q9HCK5 861 aaKnown RBP11.77□□□□□ -0.52
ZNF558-207ENST00000601372 ODF2LQ9ULJ1 636 aa11.77□□□□□ -0.52
ZNF558-207ENST00000601372 GOLGA8MH3BSY2 632 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 TROVE2P10155 538 aaKnown RBP eCLIP11.77□□□□□ -0.53
ZNF558-207ENST00000601372 SLC9A1P19634 815 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 TMEM270Q6UE05 265 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 REM2Q8IYK8 340 aaPredicted RBP11.77□□□□□ -0.53
ZNF558-207ENST00000601372 RNF10Q8N5U6 811 aaKnown RBP11.77□□□□□ -0.53
ZNF558-207ENST00000601372 CFAP36Q96G28 342 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 MMEP08473 750 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 PMS2P54278 862 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 NPEPPSP55786 919 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 DNAAF5Q86Y56 855 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 RIOX2Q8IUF8 465 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 BBS5Q8N3I7 341 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 HSPH1Q92598 858 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 TRIM51Q9BSJ1 452 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 L2HGDHQ9H9P8 463 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 CHORDC1Q9UHD1 332 aaPredicted RBP11.77□□□□□ -0.53
ZNF558-207ENST00000601372 FBXL5Q9UKA1 691 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 MAD1L1Q9Y6D9 718 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 GRID2IPA4D2P6 1211 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 EVI5O60447 810 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 AOC2O75106 756 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 SRGAP2BP0DMP2 458 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 CLCN3P51790 818 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 ELOA2Q8IYF1 753 aaPredicted RBP11.77□□□□□ -0.53
ZNF558-207ENST00000601372 NCAPGQ9BPX3 1015 aa11.77□□□□□ -0.53
ZNF558-207ENST00000601372 BTBD19C9JJ37 291 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 TRIM66O15016 1216 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 HOXA7P31268 230 aaPredicted RBP11.76□□□□□ -0.53
ZNF558-207ENST00000601372 MAN1A1P33908 653 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 SOX5P35711 763 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 GRB10Q13322 594 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 ERICH1Q86X53 443 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 TRIM11Q96F44 468 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 CPB2Q96IY4 423 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 EMSYQ7Z589 1322 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 KCPQ6ZWJ8 1503 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 FGFR4P22455 802 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 RWDD2BP57060 319 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 CACNB2Q08289 660 aaPredicted RBP11.76□□□□□ -0.53
ZNF558-207ENST00000601372 SEPT5Q99719 369 aaPredicted RBP11.76□□□□□ -0.53
ZNF558-207ENST00000601372 GPC5P78333 572 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 PRPSAP1Q14558 356 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 CCDC38Q502W7 563 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 ANKRD20A3Q5VUR7 823 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 APPL2Q8NEU8 664 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 SLC35G2Q8TBE7 412 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 CNOT8Q9UFF9 292 aaKnown RBP11.76□□□□□ -0.53
ZNF558-207ENST00000601372 AGAP1Q9UPQ3 857 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 A0A1B0GUA9 196 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 SKIP12755 728 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 LRRC14Q15048 493 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 ARL13BQ3SXY8 428 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 CCNI2Q6ZMN8 369 aaPredicted RBP11.76□□□□□ -0.53
ZNF558-207ENST00000601372 ZNF564Q8TBZ8 553 aaPredicted RBP11.76□□□□□ -0.53
ZNF558-207ENST00000601372 SYNGAP1Q96PV0 1343 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 M0QYV0 167 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 SUN1O94901 812 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 ELNP15502 786 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 MAP2K5Q13163 448 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 DLK2Q6UY11 383 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 SAMD3Q8N6K7 520 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 C1orf54Q8WWF1 131 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 DEFB118Q96PH6 123 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 KIFC3Q9BVG8 833 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 ALS2Q96Q42 1657 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 SAT1P21673 171 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 KLRC1P26715 233 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 IL9RQ01113 521 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 NLRP14Q86W24 1093 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 MAP7D3Q8IWC1 876 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 KCTD6Q8NC69 237 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 DNAJB3Q8WWF6 145 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 SLC38A7Q9NVC3 462 aa11.76□□□□□ -0.53
ZNF558-207ENST00000601372 H3BRB1 525 aa11.75□□□□□ -0.53
ZNF558-207ENST00000601372 FRMD5Q7Z6J6 570 aa11.75□□□□□ -0.53
ZNF558-207ENST00000601372 CCNYQ8ND76 341 aa11.75□□□□□ -0.53
ZNF558-207ENST00000601372 SEMA6BQ9H3T3 888 aa11.75□□□□□ -0.53
ZNF558-207ENST00000601372 TUT1Q9H6E5 874 aaKnown RBP11.75□□□□□ -0.53
ZNF558-207ENST00000601372 NHSL1Q5SYE7 1610 aa11.75□□□□□ -0.53
ZNF558-207ENST00000601372 PGK1P00558 417 aa11.75□□□□□ -0.53
ZNF558-207ENST00000601372 H2AFXP16104 143 aaPredicted RBP11.75□□□□□ -0.53
ZNF558-207ENST00000601372 MAGEA9P43362 315 aa11.75□□□□□ -0.53
ZNF558-207ENST00000601372 BASP1P80723 227 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms