RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 GADD45BO75293 160 aaPredicted RBP14.16□□□□□ -0.14
SRRM1-223ENST00000600523 TADA2AO75478 443 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 DDHD2O94830 711 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 RHOBTB3O94955 611 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 IL18RAPO95256 599 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 ITGB1P05556 798 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 CA8P35219 290 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 EHHADHQ08426 723 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 DSC1Q08554 894 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 KCNA1Q09470 495 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 STIM1Q13586 685 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 SKIV2LQ15477 1246 aaKnown RBP14.16□□□□□ -0.14
SRRM1-223ENST00000600523 EPM2AIP1Q7L775 607 aaPredicted RBP14.16□□□□□ -0.14
SRRM1-223ENST00000600523 SPRED2Q7Z698 418 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 ZNF280BQ86YH2 543 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 NELFCDQ8IXH7 590 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 COLGALT2Q8IYK4 626 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 MAFAQ8NHW3 353 aaPredicted RBP14.16□□□□□ -0.14
SRRM1-223ENST00000600523 SPPL3Q8TCT6 385 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 POF1BQ8WVV4 589 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 DDX27Q96GQ7 796 aaKnown RBP14.16□□□□□ -0.14
SRRM1-223ENST00000600523 IGSF21Q96ID5 467 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 NGRNQ9NPE2 291 aaKnown RBP14.16□□□□□ -0.14
SRRM1-223ENST00000600523 ENTPD7Q9NQZ7 604 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 CNTN3Q9P232 1028 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 HCSTQ9UBK5 93 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 DNAJB4Q9UDY4 337 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 SSX2IPQ9Y2D8 614 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 PRG3Q9Y2Y8 225 aaPredicted RBP14.16□□□□□ -0.14
SRRM1-223ENST00000600523 MTCH2Q9Y6C9 303 aa14.16□□□□□ -0.14
SRRM1-223ENST00000600523 NLRC5Q86WI3 1866 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 SMIM28A0A1B0GU29 152 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 NT5C1B-RDH14C9J2C7 533 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 NRP1O14786 923 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 GRM6O15303 877 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 TRAPPC3O43617 180 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 KLRC4O43908 158 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 LINC00271P0C7V0 271 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 PRR29P0C7W0 189 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 CXCL8P10145 99 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 KCNE1P15382 129 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 RPL9P32969 192 aaKnown RBP14.15□□□□□ -0.14
SRRM1-223ENST00000600523 PBX3P40426 434 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 SLC11A1P49279 550 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 ACOT2P49753 483 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 AFF1P51825 1210 aaKnown RBP14.15□□□□□ -0.14
SRRM1-223ENST00000600523 ELAVL2Q12926 359 aaKnown RBP14.15□□□□□ -0.14
SRRM1-223ENST00000600523 PNOCQ13519 176 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 SURF1Q15526 300 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 BMT2Q1RMZ1 405 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 SEZ6Q53EL9 994 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 GLRA4Q5JXX5 417 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 KIAA1841Q6NSI8 718 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 SLC39A4Q6P5W5 647 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 TMC7Q7Z402 723 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 GPD1LQ8N335 351 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 GSTCDQ8NEC7 633 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 SCFD1Q8WVM8 642 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 FAM213AQ9BRX8 229 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 NSUN3Q9H649 340 aaKnown RBP14.15□□□□□ -0.14
SRRM1-223ENST00000600523 ASB7Q9H672 318 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 MIOSQ9NXC5 875 aa14.15□□□□□ -0.14
SRRM1-223ENST00000600523 CPSF3Q9UKF6 684 aaKnown RBP14.15□□□□□ -0.14
SRRM1-223ENST00000600523 R3HCC1Q9Y3T6 440 aaKnown RBP14.15□□□□□ -0.14
SRRM1-223ENST00000600523 CASTOR2A6NHX0 329 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 ZNF233A6NK53 670 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 PTGESO14684 152 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 NCK2O43639 380 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 CALUO43852 315 aaPredicted RBP14.14□□□□□ -0.15
SRRM1-223ENST00000600523 EXTL3O43909 919 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 PPP1R2P41236 205 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 STK4Q13043 487 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 ADGRE1Q14246 886 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 SMC1AQ14683 1233 aaKnown RBP14.14□□□□□ -0.15
SRRM1-223ENST00000600523 SLC10A6Q3KNW5 377 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 XKR4Q5GH76 650 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 ALKAL1Q6UXT8 129 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 DDX53Q86TM3 631 aaKnown RBP14.14□□□□□ -0.15
SRRM1-223ENST00000600523 NT5DC4Q86YG4 428 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 BEST2Q8NFU1 509 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 PPM1EQ8WY54 764 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 KIF12Q96FN5 646 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 PPP1R10Q96QC0 940 aaKnown RBP14.14□□□□□ -0.15
SRRM1-223ENST00000600523 TCF25Q9BQ70 676 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 FGFBP2Q9BYJ0 223 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 UBQLN1Q9UMX0 589 aaKnown RBP14.14□□□□□ -0.15
SRRM1-223ENST00000600523 DERAQ9Y315 318 aa14.14□□□□□ -0.15
SRRM1-223ENST00000600523 SF3B1O75533 1304 aaKnown RBP eCLIP14.14□□□□□ -0.15
SRRM1-223ENST00000600523 TTC26A0AVF1 554 aa14.13□□□□□ -0.15
SRRM1-223ENST00000600523 TISP43B9A030 160 aa14.13□□□□□ -0.15
SRRM1-223ENST00000600523 PDXKO00764 312 aa14.13□□□□□ -0.15
SRRM1-223ENST00000600523 B3GAT3O94766 335 aa14.13□□□□□ -0.15
SRRM1-223ENST00000600523 CSPG5O95196 566 aa14.13□□□□□ -0.15
SRRM1-223ENST00000600523 SRGAP2BP0DMP2 458 aa14.13□□□□□ -0.15
SRRM1-223ENST00000600523 CYP3A5P20815 502 aa14.13□□□□□ -0.15
SRRM1-223ENST00000600523 RPL13P26373 211 aaKnown RBP14.13□□□□□ -0.15
SRRM1-223ENST00000600523 ADSSP30520 456 aa14.13□□□□□ -0.15
SRRM1-223ENST00000600523 TNFSF9P41273 254 aa14.13□□□□□ -0.15
SRRM1-223ENST00000600523 TMEM132DQ14C87 1099 aa14.13□□□□□ -0.15
SRRM1-223ENST00000600523 CCDC85BQ15834 202 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms