RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 ARNTL2Q8WYA1 636 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 POMGNT1Q8WZA1 660 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 SMARCE1Q969G3 411 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 FBXL18Q96ME1 805 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 FAM161BQ96MY7 647 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 SAMD11Q96NU1 681 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 MRPL9Q9BYD2 267 aaKnown RBP14.99□□□□□ -0.01
VRK3-219ENST00000600137 PRDM12Q9H4Q4 367 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 PCIF1Q9H4Z3 704 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 CNTN3Q9P232 1028 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 KIAA1468Q9P260 1216 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 MTUS1Q9ULD2 1270 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 MAPK8IP1Q9UQF2 711 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 PLXNA4Q9HCM2 1894 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 LACTBL1A8MY62 500 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 H3BNC9 293 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 PDXKO00764 312 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 CLIC2O15247 247 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 SMC2O95347 1197 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 ITGB1P05556 798 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 SLC11A1P49279 550 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 BCAR1P56945 870 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 SNRPFP62306 86 aaKnown RBP14.98□□□□□ -0.01
VRK3-219ENST00000600137 POU5F1Q01860 360 aaKnown RBP14.98□□□□□ -0.01
VRK3-219ENST00000600137 SOX4Q06945 474 aaPredicted RBP14.98□□□□□ -0.01
VRK3-219ENST00000600137 ZCWPW2Q504Y3 356 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 ISM2Q6H9L7 571 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 CD300LGQ6UXG3 332 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 SLC39A11Q8N1S5 342 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 TMEM130Q8N3G9 435 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 DEFB123Q8N688 67 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 KLHL23Q8NBE8 558 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 SPPL3Q8TCT6 385 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 BCL7CQ8WUZ0 217 aaPredicted RBP14.98□□□□□ -0.01
VRK3-219ENST00000600137 P2RX5Q93086 422 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 SAAL1Q96ER3 474 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 PAAF1Q9BRP4 392 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 PLVAPQ9BX97 442 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 PLEKHA5Q9HAU0 1116 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 CACNG4Q9UBN1 327 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 HOOK1Q9UJC3 728 aaKnown RBP14.98□□□□□ -0.01
VRK3-219ENST00000600137 TRAF3IP3Q9Y228 551 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 ATG2AQ2TAZ0 1938 aa14.98□□□□□ -0.01
VRK3-219ENST00000600137 GOLGA8IPA6NC78 632 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 GOLGA8JA6NMD2 632 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 PPP1R3GB7ZBB8 358 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 NT5C1B-RDH14C9J2C7 533 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 F8W810 466 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 NRP1O14786 923 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 GRM6O15303 877 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 THP07101 528 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 LAG3P18627 525 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 POU3F3P20264 500 aaPredicted RBP14.97□□□□□ -0.01
VRK3-219ENST00000600137 DNAJB1P25685 340 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 MATR3P43243 847 aaKnown RBP eCLIP14.97□□□□□ -0.01
VRK3-219ENST00000600137 GRIK3Q13003 919 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 KYAT1Q16773 422 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 GLRA4Q5JXX5 417 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 SLC9A9Q8IVB4 645 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 ADSSL1Q8N142 457 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 FBXO22Q8NEZ5 403 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 URGCPQ8TCY9 931 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 CCDC47Q96A33 483 aaKnown RBP14.97□□□□□ -0.01
VRK3-219ENST00000600137 CDX2Q99626 313 aaPredicted RBP14.97□□□□□ -0.01
VRK3-219ENST00000600137 GZF1Q9H116 711 aaPredicted RBP14.97□□□□□ -0.01
VRK3-219ENST00000600137 RMND1Q9NWS8 449 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 HSPBP1Q9NZL4 362 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 CGNQ9P2M7 1197 aaKnown RBP14.97□□□□□ -0.01
VRK3-219ENST00000600137 RWDD3Q9Y3V2 267 aa14.97□□□□□ -0.01
VRK3-219ENST00000600137 PRRC2BQ5JSZ5 2229 aaKnown RBP14.97□□□□□ -0.01
VRK3-219ENST00000600137 COL4A4P53420 1690 aaPredicted RBP14.97□□□□□ -0.01
VRK3-219ENST00000600137 GOLGA6L22H0YM25 854 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 EXTL3O43909 919 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 CTNNB1P35222 781 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 YARSP54577 528 aaKnown RBP14.96□□□□□ -0.01
VRK3-219ENST00000600137 PLCB3Q01970 1234 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 TUSC3Q13454 348 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 GPM6BQ13491 265 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 NFIL3Q16649 462 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 CENPPQ6IPU0 288 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 ARMCX5Q6P1M9 558 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 RBM43Q6ZSC3 357 aaKnown RBP14.96□□□□□ -0.01
VRK3-219ENST00000600137 CBWD2Q8IUF1 395 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 GDPD5Q8WTR4 605 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 C18orf25Q96B23 403 aaPredicted RBP14.96□□□□□ -0.01
VRK3-219ENST00000600137 FAM213AQ9BRX8 229 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 TMEM175Q9BSA9 504 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 VN1R3Q9BXE9 311 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 RPF1Q9H9Y2 349 aaKnown RBP14.96□□□□□ -0.01
VRK3-219ENST00000600137 ALG13Q9NP73 1137 aaKnown RBP14.96□□□□□ -0.01
VRK3-219ENST00000600137 TOPORSQ9NS56 1045 aaPredicted RBP14.96□□□□□ -0.01
VRK3-219ENST00000600137 MARCH5Q9NX47 278 aa14.96□□□□□ -0.01
VRK3-219ENST00000600137 BIN1O00499 593 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 KIAA0391O15091 583 aaKnown RBP14.95□□□□□ -0.02
VRK3-219ENST00000600137 ZC3H11AO75152 810 aaKnown RBP eCLIP14.95□□□□□ -0.02
VRK3-219ENST00000600137 FGF18O76093 207 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 LDHAP00338 332 aaKnown RBP14.95□□□□□ -0.02
VRK3-219ENST00000600137 ALDH2P05091 517 aa14.95□□□□□ -0.02
VRK3-219ENST00000600137 PMS1P54277 932 aaKnown RBP14.95□□□□□ -0.02
VRK3-219ENST00000600137 MCCD1P59942 119 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms