RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 TTPALQ9BTX7 342 aa12.18□□□□□ -0.46
GRAMD1A-209ENST00000598580 TBC1D17Q9HA65 648 aa12.18□□□□□ -0.46
GRAMD1A-209ENST00000598580 PIDD1Q9HB75 910 aa12.18□□□□□ -0.46
GRAMD1A-209ENST00000598580 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.18□□□□□ -0.46
GRAMD1A-209ENST00000598580 GDAQ9Y2T3 454 aa12.18□□□□□ -0.46
GRAMD1A-209ENST00000598580 CACNA1IQ9P0X4 2223 aa12.18□□□□□ -0.46
GRAMD1A-209ENST00000598580 ZMYM2Q9UBW7 1377 aa12.18□□□□□ -0.46
GRAMD1A-209ENST00000598580 I3L4J1 428 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 N4BP3O15049 544 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 CCL16O15467 120 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 PRKCBP05771 671 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 DCNP07585 359 aaKnown RBP12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 OR52Z1P0C646 297 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 FGFR3P22607 806 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 TOB1P50616 345 aaPredicted RBP12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 PSMD5Q16401 504 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 GLRA4Q5JXX5 417 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 TAS1R3Q7RTX0 852 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 CCDC83Q8IWF9 413 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 MAML2Q8IZL2 1156 aaPredicted RBP12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 DAW1Q8N136 415 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 CEP120Q8N960 986 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 MCPH1Q8NEM0 835 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 STAMQ92783 540 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 PPP1R10Q96QC0 940 aaKnown RBP12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 KIF2CQ99661 725 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 RTP3Q9BQQ7 232 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 GOLGA2P5Q9HBQ8 144 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 HCFC1R1Q9NWW0 138 aa12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 MTF2Q9Y483 593 aaPredicted RBP12.17□□□□□ -0.46
GRAMD1A-209ENST00000598580 NCOR2Q9Y618 2525 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 SF3B1O75533 1304 aaKnown RBP eCLIP12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 TDRD15B5MCY1 1934 aaKnown RBP12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 SHISA7A6NL88 538 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 PP2D1A8MPX8 630 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 ABLIM1O14639 778 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 THP07101 528 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 FSHRP23945 695 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 OR1D2P34982 312 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 NAMPTP43490 491 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 CLCNKBP51801 687 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 RAB33AQ14088 237 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 MAPK6Q16659 721 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 ALKAL1Q6UXT8 129 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 KCNK18Q7Z418 384 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 ZBTB8OSQ8IWT0 167 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 HACE1Q8IYU2 909 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 ADSSL1Q8N142 457 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 FBXO18Q8NFZ0 1043 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 FGF13Q92913 245 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 NKD2Q969F2 451 aaPredicted RBP12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 CCDC43Q96MW1 224 aaKnown RBP12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 ZMAT2Q96NC0 199 aaKnown RBP12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 FOXQ1Q9C009 403 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 BHMT2Q9H2M3 363 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 PTPRHQ9HD43 1115 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 SLC2A4RGQ9NR83 387 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 DNMT3BQ9UBC3 853 aaKnown RBP12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 DPP7Q9UHL4 492 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 CDH7Q9ULB5 785 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 R4GN57 208 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 NOTCH4Q99466 2003 aa12.16□□□□□ -0.46
GRAMD1A-209ENST00000598580 DMXL1Q9Y485 3027 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 SMIM28A0A1B0GU29 152 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 ARHGEF35A5YM69 484 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 C8AP07357 584 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 TKTP29401 623 aaKnown RBP12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 CDC25AP30304 524 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 BRCC3P46736 316 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 MAPK7Q13164 816 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 TRIM29Q14134 588 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 UPP1Q16831 310 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 XKR4Q5GH76 650 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 SPECC1Q5M775 1068 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 TTC38Q5R3I4 469 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 ATF7IP2Q5U623 682 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 PHLDB3Q6NSJ2 640 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 DEPTORQ8TB45 409 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 SLC7A14Q8TBB6 771 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 NXPE3Q969Y0 559 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 C8orf76Q96K31 380 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 MMTAG2Q9BU76 263 aaKnown RBP12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 PLA2G2FQ9BZM2 168 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 C2orf40Q9H1Z8 148 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 FOXP1Q9H334 677 aaPredicted RBP12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 ARHGEF3Q9NR81 526 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 MTRRQ9UBK8 725 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 LIMCH1Q9UPQ0 1083 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 KIAA1024Q9UPX6 916 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 VWA8A3KMH1 1905 aa12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 MTCL1Q9Y4B5 1905 aaKnown RBP12.15□□□□□ -0.46
GRAMD1A-209ENST00000598580 E9PMD0 336 aa12.14□□□□□ -0.47
GRAMD1A-209ENST00000598580 STK25O00506 426 aa12.14□□□□□ -0.47
GRAMD1A-209ENST00000598580 TBC1D4O60343 1298 aa12.14□□□□□ -0.47
GRAMD1A-209ENST00000598580 B3GAT3O94766 335 aa12.14□□□□□ -0.47
GRAMD1A-209ENST00000598580 HNRNPA1P09651 372 aaKnown RBP eCLIP12.14□□□□□ -0.47
GRAMD1A-209ENST00000598580 CCT6AP40227 531 aaKnown RBP12.14□□□□□ -0.47
GRAMD1A-209ENST00000598580 NPTX2P47972 431 aa12.14□□□□□ -0.47
GRAMD1A-209ENST00000598580 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms