RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 LNX1Q8TBB1 728 aaPredicted RBP17.25■□□□□ 0.35
LIG1-214ENST00000597146 PIK3R5Q8WYR1 880 aa17.25■□□□□ 0.35
LIG1-214ENST00000597146 IER2Q9BTL4 223 aa17.25■□□□□ 0.35
LIG1-214ENST00000597146 BRD9Q9H8M2 597 aa17.25■□□□□ 0.35
LIG1-214ENST00000597146 KLK14Q9P0G3 267 aa17.25■□□□□ 0.35
LIG1-214ENST00000597146 EML5Q05BV3 1969 aa17.24■□□□□ 0.35
LIG1-214ENST00000597146 MAN2B1O00754 1011 aa17.24■□□□□ 0.35
LIG1-214ENST00000597146 KIF4AO95239 1232 aa17.24■□□□□ 0.35
LIG1-214ENST00000597146 POU2F2P09086 479 aa17.24■□□□□ 0.35
LIG1-214ENST00000597146 HMGB1P09429 215 aaKnown RBP17.24■□□□□ 0.35
LIG1-214ENST00000597146 CXCL12P48061 93 aa17.24■□□□□ 0.35
LIG1-214ENST00000597146 FAM171A1Q5VUB5 890 aa17.24■□□□□ 0.35
LIG1-214ENST00000597146 B3GNT9Q6UX72 402 aa17.24■□□□□ 0.35
LIG1-214ENST00000597146 DHX32Q7L7V1 743 aaKnown RBP17.24■□□□□ 0.35
LIG1-214ENST00000597146 RNF149Q8NC42 400 aa17.24■□□□□ 0.35
LIG1-214ENST00000597146 PSPC1Q8WXF1 523 aaKnown RBP17.24■□□□□ 0.35
LIG1-214ENST00000597146 FAM3CQ92520 227 aa17.24■□□□□ 0.35
LIG1-214ENST00000597146 ELSPBP1Q96BH3 223 aa17.24■□□□□ 0.35
LIG1-214ENST00000597146 JPH2Q9BR39 696 aaPredicted RBP17.24■□□□□ 0.35
LIG1-214ENST00000597146 TTPALQ9BTX7 342 aa17.24■□□□□ 0.35
LIG1-214ENST00000597146 CASTOR2A6NHX0 329 aa17.23■□□□□ 0.35
LIG1-214ENST00000597146 K7ESF4 209 aa17.23■□□□□ 0.35
LIG1-214ENST00000597146 FOXD2O60548 495 aaPredicted RBP17.23■□□□□ 0.35
LIG1-214ENST00000597146 KCNK5O95279 499 aa17.23■□□□□ 0.35
LIG1-214ENST00000597146 GRIK3Q13003 919 aa17.23■□□□□ 0.35
LIG1-214ENST00000597146 NOTUMQ6P988 496 aa17.23■□□□□ 0.35
LIG1-214ENST00000597146 SLC7A3Q8WY07 619 aa17.23■□□□□ 0.35
LIG1-214ENST00000597146 CSRNP2Q9H175 543 aa17.23■□□□□ 0.35
LIG1-214ENST00000597146 C2orf42Q9NWW7 574 aa17.23■□□□□ 0.35
LIG1-214ENST00000597146 GIT1Q9Y2X7 761 aa17.23■□□□□ 0.35
LIG1-214ENST00000597146 PIAS3Q9Y6X2 628 aa17.23■□□□□ 0.35
LIG1-214ENST00000597146 RHOP08100 348 aa17.22■□□□□ 0.35
LIG1-214ENST00000597146 CHRNB1P11230 501 aa17.22■□□□□ 0.35
LIG1-214ENST00000597146 STPG1Q5TH74 334 aa17.22■□□□□ 0.35
LIG1-214ENST00000597146 PSAPL1Q6NUJ1 521 aa17.22■□□□□ 0.35
LIG1-214ENST00000597146 CEP68Q76N32 757 aa17.22■□□□□ 0.35
LIG1-214ENST00000597146 LONP2Q86WA8 852 aa17.22■□□□□ 0.35
LIG1-214ENST00000597146 CDR2LQ86X02 465 aaPredicted RBP17.22■□□□□ 0.35
LIG1-214ENST00000597146 C12orf50Q8NA57 414 aaPredicted RBP17.22■□□□□ 0.35
LIG1-214ENST00000597146 TRIM6Q9C030 488 aaPredicted RBP17.22■□□□□ 0.35
LIG1-214ENST00000597146 ARRDC1-AS1Q9H2J1 176 aa17.22■□□□□ 0.35
LIG1-214ENST00000597146 SMOC1Q9H4F8 434 aa17.22■□□□□ 0.35
LIG1-214ENST00000597146 DHX33Q9H6R0 707 aaKnown RBP17.22■□□□□ 0.35
LIG1-214ENST00000597146 RBM12Q9NTZ6 932 aaKnown RBP17.22■□□□□ 0.35
LIG1-214ENST00000597146 GDE1Q9NZC3 331 aa17.22■□□□□ 0.35
LIG1-214ENST00000597146 KIF26AQ9ULI4 1882 aaPredicted RBP17.22■□□□□ 0.35
LIG1-214ENST00000597146 DMXL2Q8TDJ6 3036 aa17.21■□□□□ 0.35
LIG1-214ENST00000597146 KLF18A0A0U1RQI7 1052 aa17.21■□□□□ 0.35
LIG1-214ENST00000597146 AXIN1O15169 862 aa17.21■□□□□ 0.35
LIG1-214ENST00000597146 TDP2O95551 362 aa17.21■□□□□ 0.35
LIG1-214ENST00000597146 SPINK2P20155 84 aa17.21■□□□□ 0.35
LIG1-214ENST00000597146 OR1D2P34982 312 aa17.21■□□□□ 0.35
LIG1-214ENST00000597146 PSMC5P62195 406 aa17.21■□□□□ 0.35
LIG1-214ENST00000597146 Q6ZS52 159 aa17.21■□□□□ 0.35
LIG1-214ENST00000597146 CCDC51Q96ER9 411 aa17.21■□□□□ 0.35
LIG1-214ENST00000597146 CEP170P1Q96L14 293 aa17.21■□□□□ 0.35
LIG1-214ENST00000597146 ZNF334Q9HCZ1 680 aaPredicted RBP17.21■□□□□ 0.35
LIG1-214ENST00000597146 WRAP73Q9P2S5 460 aaPredicted RBP17.21■□□□□ 0.35
LIG1-214ENST00000597146 NCANO14594 1321 aa17.21■□□□□ 0.34
LIG1-214ENST00000597146 TRIP11Q15643 1979 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 EML1O00423 815 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 B4GALT5O43286 388 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 NPTXRO95502 500 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 CCNE1P24864 410 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 PSMA5P28066 241 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 GNA11P29992 359 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 AXLP30530 894 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 GDI1P31150 447 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 CNR2P34972 360 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 ADD1P35611 737 aaKnown RBP17.2■□□□□ 0.34
LIG1-214ENST00000597146 RAB33AQ14088 237 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 EMC2Q15006 297 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 TSGA10IPQ3SY00 556 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 FAM78AQ5JUQ0 283 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 FERMT3Q86UX7 667 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 MAP4K3Q8IVH8 894 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 RASEFQ8IZ41 740 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 SPEM1Q8N4L4 309 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 KDF1Q8NAX2 398 aaPredicted RBP17.2■□□□□ 0.34
LIG1-214ENST00000597146 CCDC12Q8WUD4 166 aaPredicted RBP17.2■□□□□ 0.34
LIG1-214ENST00000597146 TCEAL4Q96EI5 215 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 JAKMIP1Q96N16 626 aaKnown RBP17.2■□□□□ 0.34
LIG1-214ENST00000597146 TRMT61BQ9BVS5 477 aaKnown RBP17.2■□□□□ 0.34
LIG1-214ENST00000597146 PARP2Q9UGN5 583 aa17.2■□□□□ 0.34
LIG1-214ENST00000597146 INO80B-WBP1J3KQ70 363 aa17.19■□□□□ 0.34
LIG1-214ENST00000597146 ARF4P18085 180 aaPredicted RBP17.19■□□□□ 0.34
LIG1-214ENST00000597146 FOXC1Q12948 553 aa17.19■□□□□ 0.34
LIG1-214ENST00000597146 PTGDRQ13258 359 aa17.19■□□□□ 0.34
LIG1-214ENST00000597146 TUSC3Q13454 348 aa17.19■□□□□ 0.34
LIG1-214ENST00000597146 AMHR2Q16671 573 aa17.19■□□□□ 0.34
LIG1-214ENST00000597146 UVSSAQ2YD98 709 aa17.19■□□□□ 0.34
LIG1-214ENST00000597146 WDR44Q5JSH3 913 aa17.19■□□□□ 0.34
LIG1-214ENST00000597146 PRSS36Q5K4E3 855 aa17.19■□□□□ 0.34
LIG1-214ENST00000597146 BLOC1S2Q6QNY1 142 aa17.19■□□□□ 0.34
LIG1-214ENST00000597146 VITQ6UXI7 678 aa17.19■□□□□ 0.34
LIG1-214ENST00000597146 HACE1Q8IYU2 909 aa17.19■□□□□ 0.34
LIG1-214ENST00000597146 IRF7Q92985 503 aa17.19■□□□□ 0.34
LIG1-214ENST00000597146 LSM14BQ9BX40 385 aaKnown RBP17.19■□□□□ 0.34
LIG1-214ENST00000597146 TMEM121BQ9BXQ6 578 aaPredicted RBP17.19■□□□□ 0.34
LIG1-214ENST00000597146 ZFP14Q9HCL3 533 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms