RNA–Protein interactions for RNA: ENST00000597057.1

EMP3-205, Transcript of epithelial membrane protein 3, humanhuman

TSL 2

Gene EMP3, Length 406 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-205ENST00000597057 ZNF576Q9H609 170 aa12.93□□□□□ -0.34
EMP3-205ENST00000597057 NRDE2Q9H7Z3 1164 aa12.93□□□□□ -0.34
EMP3-205ENST00000597057 CERS4Q9HA82 394 aa12.93□□□□□ -0.34
EMP3-205ENST00000597057 TOPORSQ9NS56 1045 aaPredicted RBP12.93□□□□□ -0.34
EMP3-205ENST00000597057 CNTN3Q9P232 1028 aa12.93□□□□□ -0.34
EMP3-205ENST00000597057 DNAJB4Q9UDY4 337 aa12.93□□□□□ -0.34
EMP3-205ENST00000597057 TRAF3IP3Q9Y228 551 aa12.93□□□□□ -0.34
EMP3-205ENST00000597057 SMIM28A0A1B0GU29 152 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 LACTBL1A8MY62 500 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 KIAA0391O15091 583 aaKnown RBP12.92□□□□□ -0.34
EMP3-205ENST00000597057 EXTL3O43909 919 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 LDHAP00338 332 aaKnown RBP12.92□□□□□ -0.34
EMP3-205ENST00000597057 KCNE1P15382 129 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 BMPR1AP36894 532 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 PBX3P40426 434 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 CYP2J2P51589 502 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 RNASELQ05823 741 aaKnown RBP12.92□□□□□ -0.34
EMP3-205ENST00000597057 DSC1Q08554 894 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 GRIK3Q13003 919 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 ZCWPW2Q504Y3 356 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 EPC2Q52LR7 807 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 GLRA4Q5JXX5 417 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 CENPPQ6IPU0 288 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 GPR153Q6NV75 609 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 CBWD2Q8IUF1 395 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 GPD1LQ8N335 351 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 FBXL18Q96ME1 805 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 RPS6KC1Q96S38 1066 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 RPF1Q9H9Y2 349 aaKnown RBP12.92□□□□□ -0.34
EMP3-205ENST00000597057 PLEKHA5Q9HAU0 1116 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 DMAC2Q9NW81 257 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 TMEM63CQ9P1W3 806 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 MTUS1Q9ULD2 1270 aa12.92□□□□□ -0.34
EMP3-205ENST00000597057 EPOPA6NHQ4 379 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 CALUO43852 315 aaPredicted RBP12.91□□□□□ -0.34
EMP3-205ENST00000597057 ZC3H11AO75152 810 aaKnown RBP eCLIP12.91□□□□□ -0.34
EMP3-205ENST00000597057 NR3C1P04150 777 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 THP07101 528 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 PMS1P54277 932 aaKnown RBP12.91□□□□□ -0.34
EMP3-205ENST00000597057 WNT7BP56706 349 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 BCAR1P56945 870 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 POU5F1Q01860 360 aaKnown RBP12.91□□□□□ -0.34
EMP3-205ENST00000597057 SPAG1Q07617 926 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 NFIL3Q16649 462 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 SPOUT1Q5T280 376 aaKnown RBP12.91□□□□□ -0.34
EMP3-205ENST00000597057 CCDC183Q5T5S1 534 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 KCNT2Q6UVM3 1135 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 SLC9A9Q8IVB4 645 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 BRSK2Q8IWQ3 736 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.91□□□□□ -0.34
EMP3-205ENST00000597057 COLGALT2Q8IYK4 626 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 XXYLT1Q8NBI6 393 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 COLGALT1Q8NBJ5 622 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 ARNTL2Q8WYA1 636 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 DHTKD1Q96HY7 919 aaPredicted RBP12.91□□□□□ -0.34
EMP3-205ENST00000597057 SAMD11Q96NU1 681 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 RWDD3Q9Y3V2 267 aa12.91□□□□□ -0.34
EMP3-205ENST00000597057 CHD7Q9P2D1 2997 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 C5orf67F2Z3F1 127 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 GALTP07902 379 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 LAG3P18627 525 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 PTMSP20962 102 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 CTNNB1P35222 781 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 PPP1R2P41236 205 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 SLC11A1P49279 550 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 ALDH7A1P49419 539 aaKnown RBP12.9□□□□□ -0.34
EMP3-205ENST00000597057 PPP2R3AQ06190 1150 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 SOX4Q06945 474 aaPredicted RBP12.9□□□□□ -0.34
EMP3-205ENST00000597057 TUSC3Q13454 348 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 STIM1Q13586 685 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 MYBPC2Q14324 1141 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 GRIN2CQ14957 1233 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 ZBTB6Q15916 424 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 SNRNP35Q16560 246 aaKnown RBP12.9□□□□□ -0.34
EMP3-205ENST00000597057 KLHL40Q2TBA0 621 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 ZNF697Q5TEC3 545 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 ANKRD40Q6AI12 368 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 CAVIN1Q6NZI2 390 aaKnown RBP12.9□□□□□ -0.34
EMP3-205ENST00000597057 TMEM130Q8N3G9 435 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 RDH13Q8NBN7 331 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 NOC3LQ8WTT2 800 aaKnown RBP12.9□□□□□ -0.34
EMP3-205ENST00000597057 P2RX5Q93086 422 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 C18orf25Q96B23 403 aaPredicted RBP12.9□□□□□ -0.34
EMP3-205ENST00000597057 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 ZNF558Q96NG5 402 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 FAM193BQ96PV7 902 aaPredicted RBP12.9□□□□□ -0.34
EMP3-205ENST00000597057 TMEM175Q9BSA9 504 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 PLVAPQ9BX97 442 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 KIAA1586Q9HCI6 787 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 AAASQ9NRG9 546 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 RBAKQ9NYW8 714 aaPredicted RBP12.9□□□□□ -0.34
EMP3-205ENST00000597057 CACNG4Q9UBN1 327 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 KIAA1671Q9BY89 1806 aa12.9□□□□□ -0.34
EMP3-205ENST00000597057 TRIM49BA6NDI0 452 aa12.89□□□□□ -0.35
EMP3-205ENST00000597057 ZNF233A6NK53 670 aa12.89□□□□□ -0.35
EMP3-205ENST00000597057 NT5C1B-RDH14C9J2C7 533 aa12.89□□□□□ -0.35
EMP3-205ENST00000597057 F8W810 466 aa12.89□□□□□ -0.35
EMP3-205ENST00000597057 RFXAPO00287 272 aa12.89□□□□□ -0.35
EMP3-205ENST00000597057 NRP1O14786 923 aa12.89□□□□□ -0.35
EMP3-205ENST00000597057 PSMA7O14818 248 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms