RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 TNNI1P19237 187 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 PBX3P40426 434 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 OR1G1P47890 313 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 TFAMQ00059 246 aaKnown RBP10.11□□□□□ -0.79
ZNF548-206ENST00000597047 ENOX2Q16206 610 aaKnown RBP10.11□□□□□ -0.79
ZNF548-206ENST00000597047 SNRNP35Q16560 246 aaKnown RBP10.11□□□□□ -0.79
ZNF548-206ENST00000597047 KYAT1Q16773 422 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 SLC10A6Q3KNW5 377 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 TCERG1LQ5VWI1 586 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 CENPPQ6IPU0 288 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 TMEM130Q8N3G9 435 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 CSGALNACT2Q8N6G5 542 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 FAM84AQ96KN4 292 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 FNBP1Q96RU3 617 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 TMEM117Q9H0C3 514 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 PDE11AQ9HCR9 933 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 CGNQ9P2M7 1197 aaKnown RBP10.11□□□□□ -0.79
ZNF548-206ENST00000597047 CACNG4Q9UBN1 327 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 CPSF3Q9UKF6 684 aaKnown RBP10.11□□□□□ -0.79
ZNF548-206ENST00000597047 STYXL1Q9Y6J8 313 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 CITO14578 2027 aa10.11□□□□□ -0.79
ZNF548-206ENST00000597047 TDRD15B5MCY1 1934 aaKnown RBP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 CASTOR2A6NHX0 329 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 THP07101 528 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 ADRB2P07550 413 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 KRT19P08727 400 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 EPB41P11171 864 aaKnown RBP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 KRT13P13646 458 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 CA8P35219 290 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 GUCY2FP51841 1108 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 SNRPFP62306 86 aaKnown RBP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 DCAF17Q5H9S7 520 aaPredicted RBP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 RASIP1Q5U651 963 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 JADE1Q6IE81 842 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 CRELD2Q6UXH1 353 aaPredicted RBP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 RBM43Q6ZSC3 357 aaKnown RBP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 ZNF280BQ86YH2 543 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 FAM186BQ8IYM0 893 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 C18orf25Q96B23 403 aaPredicted RBP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 SNX27Q96L92 541 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 POP1Q99575 1024 aaKnown RBP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 DUSP9Q99956 384 aaKnown RBP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 TRAIPQ9BWF2 469 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 PBX4Q9BYU1 374 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 SLC28A3Q9HAS3 691 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 GOLGA2P5Q9HBQ8 144 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 KIAA1586Q9HCI6 787 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 TBC1D13Q9NVG8 400 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 DNAJB4Q9UDY4 337 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 RWDD2AQ9UIY3 292 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 TRAF3IP3Q9Y228 551 aa10.1□□□□□ -0.79
ZNF548-206ENST00000597047 YBX2Q9Y2T7 364 aaKnown RBP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 PRG3Q9Y2Y8 225 aaPredicted RBP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 R3HCC1Q9Y3T6 440 aaKnown RBP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 MRPL42Q9Y6G3 142 aaKnown RBP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 FNDC1Q4ZHG4 1894 aaPredicted RBP10.1□□□□□ -0.79
ZNF548-206ENST00000597047 SMIM28A0A1B0GU29 152 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 BECN2A8MW95 431 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 PES1O00541 588 aaKnown RBP10.09□□□□□ -0.79
ZNF548-206ENST00000597047 KIAA0391O15091 583 aaKnown RBP10.09□□□□□ -0.79
ZNF548-206ENST00000597047 PHACTR2O75167 634 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 AKAP3O75969 853 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 DDHD2O94830 711 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 IL18RAPO95256 599 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 FGFR1OPO95684 399 aaKnown RBP10.09□□□□□ -0.79
ZNF548-206ENST00000597047 NFICP08651 508 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 TMEM191BP0C7N4 346 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 CTNNB1P35222 781 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 PSMC2P35998 433 aaKnown RBP10.09□□□□□ -0.79
ZNF548-206ENST00000597047 MTIF2P46199 727 aaKnown RBP10.09□□□□□ -0.79
ZNF548-206ENST00000597047 FKBP3Q00688 224 aaKnown RBP10.09□□□□□ -0.79
ZNF548-206ENST00000597047 LRRC63Q05C16 580 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 CYP24A1Q07973 514 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 TMEM132DQ14C87 1099 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 RAB30Q15771 203 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 COBLL1Q53SF7 1204 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 PPP2R2DQ66LE6 453 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 LRRC55Q6ZSA7 311 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 BRSK2Q8IWQ3 736 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 CMTR2Q8IYT2 770 aaKnown RBP10.09□□□□□ -0.79
ZNF548-206ENST00000597047 AOPEPQ8N6M6 819 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 HASPINQ8TF76 798 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 ARNTL2Q8WYA1 636 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 KCNN1Q92952 543 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 TIFAQ96CG3 184 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 FAM161BQ96MY7 647 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 ZMAT2Q96NC0 199 aaKnown RBP10.09□□□□□ -0.79
ZNF548-206ENST00000597047 MRPL9Q9BYD2 267 aaKnown RBP10.09□□□□□ -0.79
ZNF548-206ENST00000597047 NAT10Q9H0A0 1025 aaKnown RBP10.09□□□□□ -0.79
ZNF548-206ENST00000597047 NRDE2Q9H7Z3 1164 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 KANSL3Q9P2N6 904 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 MAGEC2Q9UBF1 373 aaPredicted RBP10.09□□□□□ -0.79
ZNF548-206ENST00000597047 TUBGCP4Q9UGJ1 667 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 PLAGL2Q9UPG8 496 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 FAN1Q9Y2M0 1017 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 PCDHA11Q9Y5I1 949 aa10.09□□□□□ -0.79
ZNF548-206ENST00000597047 LINC01553A4QN01 128 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 PTGESO14684 152 aa10.08□□□□□ -0.8
ZNF548-206ENST00000597047 MEFVO15553 781 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms