RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 OLFML3Q9NRN5 406 aa12.2□□□□□ -0.46
VRK3-210ENST00000596121 ATP6V1DQ9Y5K8 247 aa12.2□□□□□ -0.46
VRK3-210ENST00000596121 STYXL1Q9Y6J8 313 aa12.2□□□□□ -0.46
VRK3-210ENST00000596121 TRIP11Q15643 1979 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 A0A0B4J269 797 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 A0A1W2PQ27 194 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 A0A1W2PQ64 194 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 A0A1W2PQD8 194 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 C2orf71A6NGG8 1288 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 HNRNPDLO14979 420 aaKnown RBP12.19□□□□□ -0.46
VRK3-210ENST00000596121 KLRC4O43908 158 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 LILRB3O75022 631 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 PRPF6O94906 941 aaKnown RBP12.19□□□□□ -0.46
VRK3-210ENST00000596121 CXCL14O95715 111 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 GLP2RO95838 553 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 SLFN14P0C7P3 912 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 LIG4P49917 911 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 ASIC1P78348 528 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 KRT17Q04695 432 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 ADAM15Q13444 863 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 TUSC3Q13454 348 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 L1TD1Q5T7N2 865 aaKnown RBP12.19□□□□□ -0.46
VRK3-210ENST00000596121 EPM2AIP1Q7L775 607 aaPredicted RBP12.19□□□□□ -0.46
VRK3-210ENST00000596121 MRPL43Q8N983 215 aaKnown RBP12.19□□□□□ -0.46
VRK3-210ENST00000596121 FSIP1Q8NA03 581 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 C18orf25Q96B23 403 aaPredicted RBP12.19□□□□□ -0.46
VRK3-210ENST00000596121 PABPC5Q96DU9 382 aaKnown RBP12.19□□□□□ -0.46
VRK3-210ENST00000596121 BICD1Q96G01 975 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 TMEM169Q96HH4 297 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 B3GALT6Q96L58 329 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 ACAP3Q96P50 834 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 RPS6KC1Q96S38 1066 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 CCDC94Q9BW85 323 aaPredicted RBP12.19□□□□□ -0.46
VRK3-210ENST00000596121 GPR62Q9BZJ7 368 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 GOLGA2P5Q9HBQ8 144 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 THEGQ9P2T0 379 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 SEL1LQ9UBV2 794 aa12.19□□□□□ -0.46
VRK3-210ENST00000596121 PUF60Q9UHX1 559 aaKnown RBP12.19□□□□□ -0.46
VRK3-210ENST00000596121 TDRD15B5MCY1 1934 aaKnown RBP12.19□□□□□ -0.46
VRK3-210ENST00000596121 TTC28Q96AY4 2481 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 H3BQ06 376 aaPredicted RBP12.18□□□□□ -0.46
VRK3-210ENST00000596121 TBX10O75333 385 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 KIF4AO95239 1232 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 GCNT3O95395 438 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 THP07101 528 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 CXCL8P10145 99 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 KCNE1P15382 129 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 SCP2P22307 547 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 SPAG1Q07617 926 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 KCNC3Q14003 757 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 ENOX2Q16206 610 aaKnown RBP12.18□□□□□ -0.46
VRK3-210ENST00000596121 DUSP6Q16828 381 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 CRELD2Q6UXH1 353 aaPredicted RBP12.18□□□□□ -0.46
VRK3-210ENST00000596121 TMC7Q7Z402 723 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 CCDC65Q8IXS2 484 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 C3orf58Q8NDZ4 430 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 ATXN2LQ8WWM7 1075 aaKnown RBP12.18□□□□□ -0.46
VRK3-210ENST00000596121 HVCN1Q96D96 273 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 ASB2Q96Q27 587 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 MSTO1Q9BUK6 570 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 LRRC27Q9C0I9 530 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 TLE6Q9H808 572 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 ENTPD7Q9NQZ7 604 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 CLDND1Q9NY35 253 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 CLEC1BQ9P126 229 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 CNTN3Q9P232 1028 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 COG5Q9UP83 839 aa12.18□□□□□ -0.46
VRK3-210ENST00000596121 TTC26A0AVF1 554 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 LACTBL1A8MY62 500 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 OGTO15294 1046 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 CLASP2O75122 1294 aaKnown RBP12.17□□□□□ -0.46
VRK3-210ENST00000596121 ADRB2P07550 413 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 CLTAP09496 248 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 PRR29P0C7W0 189 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 CTSAP10619 480 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 BMP1P13497 986 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 KCNA5P22460 613 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 MATR3P43243 847 aaKnown RBP eCLIP12.17□□□□□ -0.46
VRK3-210ENST00000596121 YARSP54577 528 aaKnown RBP12.17□□□□□ -0.46
VRK3-210ENST00000596121 WNT7BP56706 349 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 AMPD3Q01432 767 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 HSP90AA2PQ14568 343 aaPredicted RBP12.17□□□□□ -0.46
VRK3-210ENST00000596121 PTPN14Q15678 1187 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 ZBTB6Q15916 424 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 KIAA0319Q5VV43 1072 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 PDE12Q6L8Q7 609 aaKnown RBP12.17□□□□□ -0.46
VRK3-210ENST00000596121 UNC13DQ70J99 1090 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 APBB1IPQ7Z5R6 666 aaPredicted RBP12.17□□□□□ -0.46
VRK3-210ENST00000596121 EFHBQ8N7U6 833 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.17□□□□□ -0.46
VRK3-210ENST00000596121 FEZF2Q8TBJ5 459 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 HASPINQ8TF76 798 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 ACCSQ96QU6 501 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 COLEC11Q9BWP8 271 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 MAGEF1Q9HAY2 307 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 NGRNQ9NPE2 291 aaKnown RBP12.17□□□□□ -0.46
VRK3-210ENST00000596121 CPSF3Q9UKF6 684 aaKnown RBP12.17□□□□□ -0.46
VRK3-210ENST00000596121 IRAK3Q9Y616 596 aa12.17□□□□□ -0.46
VRK3-210ENST00000596121 PVALEFA0A1B0GWK0 134 aa12.16□□□□□ -0.46
VRK3-210ENST00000596121 SOD2P04179 222 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms