RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 FOXK2Q01167 660 aa17.57■□□□□ 0.4
USHBP1-205ENST00000595993 MBTD1Q05BQ5 628 aa17.57■□□□□ 0.4
USHBP1-205ENST00000595993 KARSQ15046 597 aaKnown RBP17.57■□□□□ 0.4
USHBP1-205ENST00000595993 STK38Q15208 465 aa17.57■□□□□ 0.4
USHBP1-205ENST00000595993 NKD2Q969F2 451 aaPredicted RBP17.57■□□□□ 0.4
USHBP1-205ENST00000595993 EPSTI1Q96J88 318 aa17.57■□□□□ 0.4
USHBP1-205ENST00000595993 ZFP42Q96MM3 310 aa17.57■□□□□ 0.4
USHBP1-205ENST00000595993 POLD4Q9HCU8 107 aa17.57■□□□□ 0.4
USHBP1-205ENST00000595993 DNM3Q9UQ16 869 aa17.57■□□□□ 0.4
USHBP1-205ENST00000595993 GIT1Q9Y2X7 761 aa17.57■□□□□ 0.4
USHBP1-205ENST00000595993 TCHHQ07283 1943 aa17.57■□□□□ 0.4
USHBP1-205ENST00000595993 F8W810 466 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 C2CD2LO14523 706 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 NARSO43776 548 aaKnown RBP17.56■□□□□ 0.4
USHBP1-205ENST00000595993 YEATS4O95619 227 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 PLCG1P19174 1290 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 DDIT3P35638 169 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 UBA7P41226 1012 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 OR1G1P47890 313 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 SCNN1GP51170 649 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 DNM1Q05193 864 aaKnown RBP17.56■□□□□ 0.4
USHBP1-205ENST00000595993 LILRA6Q6PI73 481 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 ELMSAN1Q6PJG2 1045 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 SIX5Q8N196 739 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 KRI1Q8N9T8 703 aaKnown RBP17.56■□□□□ 0.4
USHBP1-205ENST00000595993 DTWD2Q8NBA8 298 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 MCPH1Q8NEM0 835 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 BSNDQ8WZ55 320 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 STAMQ92783 540 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 NXPE3Q969Y0 559 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 RUSC1Q9BVN2 902 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 NT5C3AQ9H0P0 336 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 PLEKHA4Q9H4M7 779 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 FNIP2Q9P278 1114 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 HES2Q9Y543 173 aa17.56■□□□□ 0.4
USHBP1-205ENST00000595993 KRBA1A5PL33 1030 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 SPDYE4A6NLX3 237 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 SPTLC2O15270 562 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 SLC26A4O43511 780 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 RFPL2O75678 378 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 ARF4P18085 180 aaPredicted RBP17.55■□□□□ 0.4
USHBP1-205ENST00000595993 ANGPT1Q15389 498 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 DAW1Q8N136 415 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 SLC44A3Q8N4M1 653 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 CPB2Q96IY4 423 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 CDK5RAP3Q96JB5 506 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 MYADMQ96S97 322 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 GPR62Q9BZJ7 368 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 CCSER1Q9C0I3 900 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.55■□□□□ 0.4
USHBP1-205ENST00000595993 BLOC1S4Q9NUP1 217 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 ZDHHC7Q9NXF8 308 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 MYH11P35749 1972 aa17.55■□□□□ 0.4
USHBP1-205ENST00000595993 PPP6R2O75170 966 aa17.54■□□□□ 0.4
USHBP1-205ENST00000595993 PLA2G4BP0C869 781 aa17.54■□□□□ 0.4
USHBP1-205ENST00000595993 SRFP11831 508 aa17.54■□□□□ 0.4
USHBP1-205ENST00000595993 SLC12A3P55017 1021 aa17.54■□□□□ 0.4
USHBP1-205ENST00000595993 TFDP1Q14186 410 aa17.54■□□□□ 0.4
USHBP1-205ENST00000595993 RINT1Q6NUQ1 792 aa17.54■□□□□ 0.4
USHBP1-205ENST00000595993 C1orf186Q6ZWK4 172 aa17.54■□□□□ 0.4
USHBP1-205ENST00000595993 SYT2Q8N9I0 419 aaPredicted RBP17.54■□□□□ 0.4
USHBP1-205ENST00000595993 RSAD2Q8WXG1 361 aa17.54■□□□□ 0.4
USHBP1-205ENST00000595993 SMG7Q92540 1137 aaKnown RBP17.54■□□□□ 0.4
USHBP1-205ENST00000595993 CALML4Q96GE6 196 aa17.54■□□□□ 0.4
USHBP1-205ENST00000595993 COLEC11Q9BWP8 271 aa17.54■□□□□ 0.4
USHBP1-205ENST00000595993 NXF3Q9H4D5 531 aaKnown RBP17.54■□□□□ 0.4
USHBP1-205ENST00000595993 FBXL21Q9UKT6 434 aa17.54■□□□□ 0.4
USHBP1-205ENST00000595993 A0A087X0B3 334 aa17.53■□□□□ 0.4
USHBP1-205ENST00000595993 A0A1B0GUA9 196 aa17.53■□□□□ 0.4
USHBP1-205ENST00000595993 ANHXE9PGG2 379 aa17.53■□□□□ 0.4
USHBP1-205ENST00000595993 INO80B-WBP1J3KQ70 363 aa17.53■□□□□ 0.4
USHBP1-205ENST00000595993 TGM5O43548 720 aa17.53■□□□□ 0.4
USHBP1-205ENST00000595993 NCBP1Q09161 790 aaKnown RBP17.53■□□□□ 0.4
USHBP1-205ENST00000595993 MAPK7Q13164 816 aa17.53■□□□□ 0.4
USHBP1-205ENST00000595993 USP41Q3LFD5 358 aa17.53■□□□□ 0.4
USHBP1-205ENST00000595993 FUT10Q6P4F1 479 aa17.53■□□□□ 0.4
USHBP1-205ENST00000595993 KCTD17Q8N5Z5 321 aa17.53■□□□□ 0.4
USHBP1-205ENST00000595993 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.53■□□□□ 0.4
USHBP1-205ENST00000595993 ADAM28Q9UKQ2 775 aa17.53■□□□□ 0.4
USHBP1-205ENST00000595993 LRRIQ4A6NIV6 560 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 B4GALT5O43286 388 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 HIP1RO75146 1068 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 NR1I2O75469 434 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 CFHP08603 1231 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 LAMP2P13473 410 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 GBP2P32456 591 aaPredicted RBP17.52■□□□□ 0.4
USHBP1-205ENST00000595993 GRIK3Q13003 919 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 MCM6Q14566 821 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 ARSHQ5FYA8 562 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 AXDND1Q5T1B0 1012 aaPredicted RBP17.52■□□□□ 0.4
USHBP1-205ENST00000595993 PHLDB3Q6NSJ2 640 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 SLC27A1Q6PCB7 646 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 PPP4R3CPQ6ZMV5 832 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 HACE1Q8IYU2 909 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 RASSF8Q8NHQ8 419 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 RAD54LQ92698 747 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 B3GALT6Q96L58 329 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 PRKD2Q9BZL6 878 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 DLGAP2Q9P1A6 1054 aa17.52■□□□□ 0.4
USHBP1-205ENST00000595993 DNAH14Q0VDD8 3507 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms