RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 CHD7Q9P2D1 2997 aa15.65■□□□□ 0.1
LIG1-208ENST00000595758 SMIM28A0A1B0GU29 152 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 MEFVO15553 781 aaPredicted RBP15.64■□□□□ 0.09
LIG1-208ENST00000595758 TGFB1I1O43294 461 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 FGF18O76093 207 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 KIF20AO95235 890 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 ITGB1P05556 798 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 CXCL8P10145 99 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 KCNE1P15382 129 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 IGFBP4P22692 258 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 SLC11A1P49279 550 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 ACOT2P49753 483 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 SNRPFP62306 86 aaKnown RBP15.64■□□□□ 0.09
LIG1-208ENST00000595758 ENOX2Q16206 610 aaKnown RBP15.64■□□□□ 0.09
LIG1-208ENST00000595758 GLRA4Q5JXX5 417 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 ARMCX5Q6P1M9 558 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 HS2ST1Q7LGA3 356 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 SLC39A11Q8N1S5 342 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 SPATA20Q8TB22 786 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 SPPL3Q8TCT6 385 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 PCIF1Q9H4Z3 704 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 AGPAT3Q9NRZ7 376 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 FAN1Q9Y2M0 1017 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 SZT2Q5T011 3432 aa15.64■□□□□ 0.09
LIG1-208ENST00000595758 RALGAPA2Q2PPJ7 1873 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 TTC26A0AVF1 554 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 NT5C1B-RDH14C9J2C7 533 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 KIAA0391O15091 583 aaKnown RBP15.63■□□□□ 0.09
LIG1-208ENST00000595758 GRM6O15303 877 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 EXTL3O43909 919 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 LDHAP00338 332 aaKnown RBP15.63■□□□□ 0.09
LIG1-208ENST00000595758 FOSL2P15408 326 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 OR1G1P47890 313 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 PLCB3Q01970 1234 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 KRT17Q04695 432 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 PPP2R3AQ06190 1150 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 TUSC3Q13454 348 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 PTPROQ16827 1216 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 GOLGA5Q8TBA6 731 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 SAAL1Q96ER3 474 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 ZMAT2Q96NC0 199 aaKnown RBP15.63■□□□□ 0.09
LIG1-208ENST00000595758 PPP1R10Q96QC0 940 aaKnown RBP15.63■□□□□ 0.09
LIG1-208ENST00000595758 FAM213AQ9BRX8 229 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 GTPBP4Q9BZE4 634 aaKnown RBP15.63■□□□□ 0.09
LIG1-208ENST00000595758 SLC38A7Q9NVC3 462 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 CNTN3Q9P232 1028 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 CGNQ9P2M7 1197 aaKnown RBP15.63■□□□□ 0.09
LIG1-208ENST00000595758 PUF60Q9UHX1 559 aaKnown RBP15.63■□□□□ 0.09
LIG1-208ENST00000595758 MAPK8IP1Q9UQF2 711 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 PRG3Q9Y2Y8 225 aaPredicted RBP15.63■□□□□ 0.09
LIG1-208ENST00000595758 NLRC5Q86WI3 1866 aa15.63■□□□□ 0.09
LIG1-208ENST00000595758 GOLGA8IPA6NC78 632 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 GOLGA8JA6NMD2 632 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 LACTBL1A8MY62 500 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 NRP1O14786 923 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 ADRB2P07550 413 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 POU3F3P20264 500 aaPredicted RBP15.62■□□□□ 0.09
LIG1-208ENST00000595758 POU5F1Q01860 360 aaKnown RBP15.62■□□□□ 0.09
LIG1-208ENST00000595758 UBE3AQ05086 875 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 NAB2Q15742 525 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 CAMK4Q16566 473 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 ZNF658Q5TYW1 1059 aaPredicted RBP15.62■□□□□ 0.09
LIG1-208ENST00000595758 CRELD2Q6UXH1 353 aaPredicted RBP15.62■□□□□ 0.09
LIG1-208ENST00000595758 CD302Q8IX05 232 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 GUF1Q8N442 669 aaKnown RBP15.62■□□□□ 0.09
LIG1-208ENST00000595758 NOC3LQ8WTT2 800 aaKnown RBP15.62■□□□□ 0.09
LIG1-208ENST00000595758 POF1BQ8WVV4 589 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 MRPL38Q96DV4 380 aaKnown RBP15.62■□□□□ 0.09
LIG1-208ENST00000595758 FAM212AQ96EL1 285 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 TMEM169Q96HH4 297 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 IGSF21Q96ID5 467 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 COLEC11Q9BWP8 271 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 LMAN2LQ9H0V9 348 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 HSPBP1Q9NZL4 362 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 LMCD1Q9NZU5 365 aa15.62■□□□□ 0.09
LIG1-208ENST00000595758 KIAA1671Q9BY89 1806 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 CASTOR2A6NHX0 329 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 CLIC2O15247 247 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 DNAJB1P25685 340 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 SPAG1Q07617 926 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 TMEM173Q86WV6 379 aaPredicted RBP15.61■□□□□ 0.09
LIG1-208ENST00000595758 SMYD4Q8IYR2 804 aaPredicted RBP15.61■□□□□ 0.09
LIG1-208ENST00000595758 GPD1LQ8N335 351 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 ZSWIM2Q8NEG5 633 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 BCL7CQ8WUZ0 217 aaPredicted RBP15.61■□□□□ 0.09
LIG1-208ENST00000595758 RABGGTAQ92696 567 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 KIF12Q96FN5 646 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 TSPAN18Q96SJ8 248 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 KCTD10Q9H3F6 313 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 CLSTN2Q9H4D0 955 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 KIAA1586Q9HCI6 787 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 MAN1B1Q9UKM7 699 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 LZTS1Q9Y250 596 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 MTCH2Q9Y6C9 303 aa15.61■□□□□ 0.09
LIG1-208ENST00000595758 TULP1O00294 542 aaPredicted RBP15.6■□□□□ 0.09
LIG1-208ENST00000595758 PDXKO00764 312 aa15.6■□□□□ 0.09
LIG1-208ENST00000595758 IL18RAPO95256 599 aa15.6■□□□□ 0.09
LIG1-208ENST00000595758 CYP2J2P51589 502 aa15.6■□□□□ 0.09
LIG1-208ENST00000595758 HSP90AA2PQ14568 343 aaPredicted RBP15.6■□□□□ 0.09
LIG1-208ENST00000595758 ISM2Q6H9L7 571 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms