RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 PRPHP41219 470 aa18.72■□□□□ 0.59
CCDC9-202ENST00000595659 DMP1Q13316 513 aaPredicted RBP18.72■□□□□ 0.59
CCDC9-202ENST00000595659 TDGQ13569 410 aa18.72■□□□□ 0.59
CCDC9-202ENST00000595659 PSMD5Q16401 504 aa18.72■□□□□ 0.59
CCDC9-202ENST00000595659 C1orf186Q6ZWK4 172 aa18.72■□□□□ 0.59
CCDC9-202ENST00000595659 ACO2Q99798 780 aaKnown RBP18.72■□□□□ 0.59
CCDC9-202ENST00000595659 MFSD1Q9H3U5 465 aa18.72■□□□□ 0.59
CCDC9-202ENST00000595659 PLEKHA4Q9H4M7 779 aa18.72■□□□□ 0.59
CCDC9-202ENST00000595659 KMT5AQ9NQR1 393 aa18.72■□□□□ 0.59
CCDC9-202ENST00000595659 TNFSF13BQ9Y275 285 aa18.72■□□□□ 0.59
CCDC9-202ENST00000595659 CLUHO75153 1309 aa18.72■□□□□ 0.59
CCDC9-202ENST00000595659 VWA3AA6NCI4 1184 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 I3L4J1 428 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 SLC16A4O15374 487 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 NARSO43776 548 aaKnown RBP18.71■□□□□ 0.59
CCDC9-202ENST00000595659 B3GAT3O94766 335 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 HARSP12081 509 aaKnown RBP18.71■□□□□ 0.59
CCDC9-202ENST00000595659 CLCNKBP51801 687 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 MAPK7Q13164 816 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 ZNF568Q3ZCX4 644 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 RILPL1Q5EBL4 403 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 GET4Q7L5D6 327 aaPredicted RBP18.71■□□□□ 0.59
CCDC9-202ENST00000595659 GPR65Q8IYL9 337 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 TMEM105Q8N8V8 129 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 HDAC7Q8WUI4 952 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 PIK3R5Q8WYR1 880 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 PNMA5Q96PV4 448 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 PPP1R10Q96QC0 940 aaKnown RBP18.71■□□□□ 0.59
CCDC9-202ENST00000595659 PRKD2Q9BZL6 878 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 CDT1Q9H211 546 aa18.71■□□□□ 0.59
CCDC9-202ENST00000595659 H0Y858 1186 aa18.7■□□□□ 0.58
CCDC9-202ENST00000595659 ATP2C1P98194 919 aaPredicted RBP18.7■□□□□ 0.58
CCDC9-202ENST00000595659 CREMQ03060 361 aa18.7■□□□□ 0.58
CCDC9-202ENST00000595659 FLCNQ8NFG4 579 aa18.7■□□□□ 0.58
CCDC9-202ENST00000595659 STAMQ92783 540 aa18.7■□□□□ 0.58
CCDC9-202ENST00000595659 ZBTB45Q96K62 511 aaPredicted RBP18.7■□□□□ 0.58
CCDC9-202ENST00000595659 DRC1Q96MC2 740 aa18.7■□□□□ 0.58
CCDC9-202ENST00000595659 PRRX2Q99811 253 aa18.7■□□□□ 0.58
CCDC9-202ENST00000595659 TCHPQ9BT92 498 aa18.7■□□□□ 0.58
CCDC9-202ENST00000595659 MRPL4Q9BYD3 311 aaKnown RBP18.7■□□□□ 0.58
CCDC9-202ENST00000595659 TMEM134Q9H6X4 195 aa18.7■□□□□ 0.58
CCDC9-202ENST00000595659 PTPRHQ9HD43 1115 aa18.7■□□□□ 0.58
CCDC9-202ENST00000595659 ZDHHC7Q9NXF8 308 aa18.7■□□□□ 0.58
CCDC9-202ENST00000595659 ARHGAP28Q9P2N2 729 aa18.7■□□□□ 0.58
CCDC9-202ENST00000595659 PHLPP2Q6ZVD8 1323 aa18.7■□□□□ 0.58
CCDC9-202ENST00000595659 NPHP3-ACAD11A0A0J9YXS1 232 aa18.69■□□□□ 0.58
CCDC9-202ENST00000595659 SMIM28A0A1B0GU29 152 aa18.69■□□□□ 0.58
CCDC9-202ENST00000595659 ZMYND10O75800 440 aa18.69■□□□□ 0.58
CCDC9-202ENST00000595659 GRM5P41594 1212 aa18.69■□□□□ 0.58
CCDC9-202ENST00000595659 BRCC3P46736 316 aa18.69■□□□□ 0.58
CCDC9-202ENST00000595659 YARSP54577 528 aaKnown RBP18.69■□□□□ 0.58
CCDC9-202ENST00000595659 NTHL1P78549 312 aa18.69■□□□□ 0.58
CCDC9-202ENST00000595659 SOX4Q06945 474 aaPredicted RBP18.69■□□□□ 0.58
CCDC9-202ENST00000595659 CD300LGQ6UXG3 332 aa18.69■□□□□ 0.58
CCDC9-202ENST00000595659 CYP26C1Q6V0L0 522 aa18.69■□□□□ 0.58
CCDC9-202ENST00000595659 APBB1IPQ7Z5R6 666 aaPredicted RBP18.69■□□□□ 0.58
CCDC9-202ENST00000595659 C3orf58Q8NDZ4 430 aa18.69■□□□□ 0.58
CCDC9-202ENST00000595659 ATOH1Q92858 354 aaPredicted RBP18.69■□□□□ 0.58
CCDC9-202ENST00000595659 CCDC94Q9BW85 323 aaPredicted RBP18.69■□□□□ 0.58
CCDC9-202ENST00000595659 FBXL21Q9UKT6 434 aa18.69■□□□□ 0.58
CCDC9-202ENST00000595659 SMC3Q9UQE7 1217 aa18.69■□□□□ 0.58
CCDC9-202ENST00000595659 CCL16O15467 120 aa18.68■□□□□ 0.58
CCDC9-202ENST00000595659 PLA2G4BP0C869 781 aa18.68■□□□□ 0.58
CCDC9-202ENST00000595659 TKTP29401 623 aaKnown RBP18.68■□□□□ 0.58
CCDC9-202ENST00000595659 OR1D2P34982 312 aa18.68■□□□□ 0.58
CCDC9-202ENST00000595659 CACNB1Q02641 598 aaPredicted RBP18.68■□□□□ 0.58
CCDC9-202ENST00000595659 ELAVL2Q12926 359 aaKnown RBP18.68■□□□□ 0.58
CCDC9-202ENST00000595659 UPP1Q16831 310 aa18.68■□□□□ 0.58
CCDC9-202ENST00000595659 SEZ6Q53EL9 994 aa18.68■□□□□ 0.58
CCDC9-202ENST00000595659 LIN9Q5TKA1 542 aa18.68■□□□□ 0.58
CCDC9-202ENST00000595659 ASTLQ6HA08 431 aaPredicted RBP18.68■□□□□ 0.58
CCDC9-202ENST00000595659 DCLRE1AQ6PJP8 1040 aa18.68■□□□□ 0.58
CCDC9-202ENST00000595659 RSPO2Q6UXX9 243 aaPredicted RBP18.68■□□□□ 0.58
CCDC9-202ENST00000595659 GRASPQ7Z6J2 395 aaPredicted RBP18.68■□□□□ 0.58
CCDC9-202ENST00000595659 CDK5RAP3Q96JB5 506 aa18.68■□□□□ 0.58
CCDC9-202ENST00000595659 ZMAT2Q96NC0 199 aaKnown RBP18.68■□□□□ 0.58
CCDC9-202ENST00000595659 RHOBTB2Q9BYZ6 727 aa18.68■□□□□ 0.58
CCDC9-202ENST00000595659 UPF2Q9HAU5 1272 aaKnown RBP18.68■□□□□ 0.58
CCDC9-202ENST00000595659 IGSF9Q9P2J2 1179 aa18.68■□□□□ 0.58
CCDC9-202ENST00000595659 FBXW11Q9UKB1 542 aa18.68■□□□□ 0.58
CCDC9-202ENST00000595659 POLIQ9UNA4 740 aa18.68■□□□□ 0.58
CCDC9-202ENST00000595659 DUSP12Q9UNI6 340 aa18.68■□□□□ 0.58
CCDC9-202ENST00000595659 RBM19Q9Y4C8 960 aaKnown RBP18.68■□□□□ 0.58
CCDC9-202ENST00000595659 C8AP07357 584 aa18.67■□□□□ 0.58
CCDC9-202ENST00000595659 CFHP08603 1231 aa18.67■□□□□ 0.58
CCDC9-202ENST00000595659 FGFR3P22607 806 aa18.67■□□□□ 0.58
CCDC9-202ENST00000595659 GUCY2CP25092 1073 aa18.67■□□□□ 0.58
CCDC9-202ENST00000595659 PPM1LQ5SGD2 360 aa18.67■□□□□ 0.58
CCDC9-202ENST00000595659 LARP1BQ659C4 914 aaKnown RBP18.67■□□□□ 0.58
CCDC9-202ENST00000595659 ALKAL1Q6UXT8 129 aa18.67■□□□□ 0.58
CCDC9-202ENST00000595659 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.67■□□□□ 0.58
CCDC9-202ENST00000595659 SIX5Q8N196 739 aa18.67■□□□□ 0.58
CCDC9-202ENST00000595659 SYT2Q8N9I0 419 aaPredicted RBP18.67■□□□□ 0.58
CCDC9-202ENST00000595659 C18orf25Q96B23 403 aaPredicted RBP18.67■□□□□ 0.58
CCDC9-202ENST00000595659 ACAP3Q96P50 834 aa18.67■□□□□ 0.58
CCDC9-202ENST00000595659 TOPORSQ9NS56 1045 aaPredicted RBP18.67■□□□□ 0.58
CCDC9-202ENST00000595659 ANKFY1Q9P2R3 1169 aa18.67■□□□□ 0.58
CCDC9-202ENST00000595659 EPS15L1Q9UBC2 864 aa18.67■□□□□ 0.58
CCDC9-202ENST00000595659 ZNF318Q5VUA4 2279 aa18.67■□□□□ 0.58
CCDC9-202ENST00000595659 ABLIM1O14639 778 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms