RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	GART	P22102	1010 aa		24.95	■■□□□ 1.58
PNKP-205	ENST00000595081	SLC11A1	P49279	550 aa		24.95	■■□□□ 1.58
PNKP-205	ENST00000595081	DSC1	Q08554	894 aa		24.95	■■□□□ 1.58
PNKP-205	ENST00000595081	ADGRE1	Q14246	886 aa		24.95	■■□□□ 1.58
PNKP-205	ENST00000595081	XKR4	Q5GH76	650 aa		24.95	■■□□□ 1.58
PNKP-205	ENST00000595081	ARMCX5	Q6P1M9	558 aa		24.95	■■□□□ 1.58
PNKP-205	ENST00000595081	COLGALT2	Q8IYK4	626 aa		24.95	■■□□□ 1.58
PNKP-205	ENST00000595081	GSDMA	Q96QA5	445 aa		24.95	■■□□□ 1.58
PNKP-205	ENST00000595081	ALG13	Q9NP73	1137 aa	Known RBP	24.95	■■□□□ 1.58
PNKP-205	ENST00000595081	AGPAT3	Q9NRZ7	376 aa		24.95	■■□□□ 1.58
PNKP-205	ENST00000595081	RMND1	Q9NWS8	449 aa		24.95	■■□□□ 1.58
PNKP-205	ENST00000595081	CACNG4	Q9UBN1	327 aa		24.95	■■□□□ 1.58
PNKP-205	ENST00000595081	CPSF3	Q9UKF6	684 aa	Known RBP	24.95	■■□□□ 1.58
PNKP-205	ENST00000595081	ITGB1	P05556	798 aa		24.94	■■□□□ 1.58
PNKP-205	ENST00000595081	TH	P07101	528 aa		24.94	■■□□□ 1.58
PNKP-205	ENST00000595081	GALT	P07902	379 aa		24.94	■■□□□ 1.58
PNKP-205	ENST00000595081	ALDH7A1	P49419	539 aa	Known RBP	24.94	■■□□□ 1.58
PNKP-205	ENST00000595081	KYAT1	Q16773	422 aa		24.94	■■□□□ 1.58
PNKP-205	ENST00000595081	TMEM173	Q86WV6	379 aa	Predicted RBP	24.94	■■□□□ 1.58
PNKP-205	ENST00000595081	ZMAT2	Q96NC0	199 aa	Known RBP	24.94	■■□□□ 1.58
PNKP-205	ENST00000595081	FAM213A	Q9BRX8	229 aa		24.94	■■□□□ 1.58
PNKP-205	ENST00000595081	RPF1	Q9H9Y2	349 aa	Known RBP	24.94	■■□□□ 1.58
PNKP-205	ENST00000595081	CNTN3	Q9P232	1028 aa		24.94	■■□□□ 1.58
PNKP-205	ENST00000595081	SMIM28	A0A1B0GU29	152 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	GOLGA8IP	A6NC78	632 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	GOLGA8J	A6NMD2	632 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	CLIC2	O15247	247 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	GRM6	O15303	877 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	FGF18	O76093	207 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	SPAG1	Q07617	926 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	NAB2	Q15742	525 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	ISM2	Q6H9L7	571 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	CRELD2	Q6UXH1	353 aa	Predicted RBP	24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	HS2ST1	Q7LGA3	356 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	SLC39A11	Q8N1S5	342 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	GPT2	Q8TD30	523 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	NOC3L	Q8WTT2	800 aa	Known RBP	24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	BCL7C	Q8WUZ0	217 aa	Predicted RBP	24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	RABGGTA	Q92696	567 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	P2RX5	Q93086	422 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	PPP1R10	Q96QC0	940 aa	Known RBP	24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	TMEM175	Q9BSA9	504 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	SPG21	Q9NZD8	308 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	MAN1B1	Q9UKM7	699 aa		24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	PRG3	Q9Y2Y8	225 aa	Predicted RBP	24.93	■■□□□ 1.58
PNKP-205	ENST00000595081	TDRD15	B5MCY1	1934 aa	Known RBP	24.92	■■□□□ 1.58
PNKP-205	ENST00000595081	TTC26	A0AVF1	554 aa		24.92	■■□□□ 1.58
PNKP-205	ENST00000595081	CASTOR2	A6NHX0	329 aa		24.92	■■□□□ 1.58
PNKP-205	ENST00000595081	LACTBL1	A8MY62	500 aa		24.92	■■□□□ 1.58
PNKP-205	ENST00000595081	CSPG5	O95196	566 aa		24.92	■■□□□ 1.58
PNKP-205	ENST00000595081	KCNE1	P15382	129 aa		24.92	■■□□□ 1.58
PNKP-205	ENST00000595081	OR1G1	P47890	313 aa		24.92	■■□□□ 1.58
PNKP-205	ENST00000595081	FAM212A	Q96EL1	285 aa		24.92	■■□□□ 1.58
PNKP-205	ENST00000595081	GAS2L1	Q99501	681 aa	Predicted RBP	24.92	■■□□□ 1.58
PNKP-205	ENST00000595081	KCTD10	Q9H3F6	313 aa		24.92	■■□□□ 1.58
PNKP-205	ENST00000595081	HSPBP1	Q9NZL4	362 aa		24.92	■■□□□ 1.58
PNKP-205	ENST00000595081		F8W810	466 aa		24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	NRP1	O14786	923 aa		24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	IGFBP4	P22692	258 aa		24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	DNAJB1	P25685	340 aa		24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	PPM1A	P35813	382 aa		24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	PPP2R3A	Q06190	1150 aa		24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	TUSC3	Q13454	348 aa		24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	ZNF658	Q5TYW1	1059 aa	Predicted RBP	24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	SPPL3	Q8TCT6	385 aa		24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	PAAF1	Q9BRP4	392 aa		24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	CLSTN2	Q9H4D0	955 aa		24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	PLEKHA5	Q9HAU0	1116 aa		24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	FAN1	Q9Y2M0	1017 aa		24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	CIT	O14578	2027 aa		24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	TRIP11	Q15643	1979 aa		24.91	■■□□□ 1.58
PNKP-205	ENST00000595081	BIN1	O00499	593 aa		24.9	■■□□□ 1.58
PNKP-205	ENST00000595081	EXTL3	O43909	919 aa		24.9	■■□□□ 1.58
PNKP-205	ENST00000595081	ALDH2	P05091	517 aa		24.9	■■□□□ 1.58
PNKP-205	ENST00000595081	FOSL2	P15408	326 aa		24.9	■■□□□ 1.58
PNKP-205	ENST00000595081	CYP2J2	P51589	502 aa		24.9	■■□□□ 1.58
PNKP-205	ENST00000595081	SOX4	Q06945	474 aa	Predicted RBP	24.9	■■□□□ 1.58
PNKP-205	ENST00000595081	GPD1L	Q8N335	351 aa		24.9	■■□□□ 1.58
PNKP-205	ENST00000595081	GUF1	Q8N442	669 aa	Known RBP	24.9	■■□□□ 1.58
PNKP-205	ENST00000595081	C18orf25	Q96B23	403 aa	Predicted RBP	24.9	■■□□□ 1.58
PNKP-205	ENST00000595081	GOLGA2P5	Q9HBQ8	144 aa		24.9	■■□□□ 1.58
PNKP-205	ENST00000595081	MARCH5	Q9NX47	278 aa		24.9	■■□□□ 1.58
PNKP-205	ENST00000595081	TULP1	O00294	542 aa	Predicted RBP	24.89	■■□□□ 1.58
PNKP-205	ENST00000595081	KIF20A	O95235	890 aa		24.89	■■□□□ 1.58
PNKP-205	ENST00000595081	LDHA	P00338	332 aa	Known RBP	24.89	■■□□□ 1.58
PNKP-205	ENST00000595081	ADRB2	P07550	413 aa		24.89	■■□□□ 1.58
PNKP-205	ENST00000595081	WNT7B	P56706	349 aa		24.89	■■□□□ 1.58
PNKP-205	ENST00000595081	SNRPF	P62306	86 aa	Known RBP	24.89	■■□□□ 1.58
PNKP-205	ENST00000595081	TMEM130	Q8N3G9	435 aa		24.89	■■□□□ 1.58
PNKP-205	ENST00000595081	POF1B	Q8WVV4	589 aa		24.89	■■□□□ 1.58
PNKP-205	ENST00000595081	IGSF21	Q96ID5	467 aa		24.89	■■□□□ 1.58
PNKP-205	ENST00000595081	KIAA0391	O15091	583 aa	Known RBP	24.88	■■□□□ 1.57
PNKP-205	ENST00000595081	PRCP	P42785	496 aa		24.88	■■□□□ 1.57
PNKP-205	ENST00000595081	PLCB3	Q01970	1234 aa		24.88	■■□□□ 1.57
PNKP-205	ENST00000595081	CAMK1	Q14012	370 aa		24.88	■■□□□ 1.57
PNKP-205	ENST00000595081	CBWD2	Q8IUF1	395 aa		24.88	■■□□□ 1.57
PNKP-205	ENST00000595081	GOLGA5	Q8TBA6	731 aa		24.88	■■□□□ 1.57
PNKP-205	ENST00000595081	KIF12	Q96FN5	646 aa		24.88	■■□□□ 1.57
PNKP-205	ENST00000595081	TMEM169	Q96HH4	297 aa		24.88	■■□□□ 1.57
PNKP-205	ENST00000595081	NUP62CL	Q9H1M0	184 aa		24.88	■■□□□ 1.57

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms