RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 TMEM192Q8IY95 271 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 SEMA4DQ92854 862 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 PHF24Q9UPV7 400 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 TRPV2Q9Y5S1 764 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 CDY2AQ9Y6F7 541 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 TULP1O00294 542 aaPredicted RBP22.5■■□□□ 1.19
PNKP-203ENST00000593946 LRRN2O75325 713 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 C4BPAP04003 597 aaKnown RBP22.5■■□□□ 1.19
PNKP-203ENST00000593946 CLTAP09496 248 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 RFX1P22670 979 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 JAM2P57087 298 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 OSTNP61366 133 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 MTF1Q14872 753 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 DCAF4L1Q3SXM0 396 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 PHLDB3Q6NSJ2 640 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 NOTUMQ6P988 496 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 GJB7Q6PEY0 223 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 WDR49Q8IV35 697 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 SLC43A3Q8NBI5 491 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 TAS1R2Q8TE23 839 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 FAM84AQ96KN4 292 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 SPTLC3Q9NUV7 552 aa22.5■■□□□ 1.19
PNKP-203ENST00000593946 KBTBD13C9JR72 458 aa22.49■■□□□ 1.19
PNKP-203ENST00000593946 STAG3L1P0CL83 205 aa22.49■■□□□ 1.19
PNKP-203ENST00000593946 PTK7Q13308 1070 aa22.49■■□□□ 1.19
PNKP-203ENST00000593946 MTFR1Q15390 333 aa22.49■■□□□ 1.19
PNKP-203ENST00000593946 TDRD10Q5VZ19 366 aaKnown RBP22.49■■□□□ 1.19
PNKP-203ENST00000593946 SLC27A1Q6PCB7 646 aa22.49■■□□□ 1.19
PNKP-203ENST00000593946 SENP6Q9GZR1 1112 aaPredicted RBP22.49■■□□□ 1.19
PNKP-203ENST00000593946 RPF1Q9H9Y2 349 aaKnown RBP22.49■■□□□ 1.19
PNKP-203ENST00000593946 RAB20Q9NX57 234 aa22.49■■□□□ 1.19
PNKP-203ENST00000593946 AIPL1Q9NZN9 384 aa22.49■■□□□ 1.19
PNKP-203ENST00000593946 PDCD11Q14690 1871 aaKnown RBP22.49■■□□□ 1.19
PNKP-203ENST00000593946 IL18RAPO95256 599 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 CXCL8P10145 99 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 AP3M2P53677 418 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 MGAT3Q09327 533 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 SFMBT2Q5VUG0 894 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 APBB1IPQ7Z5R6 666 aaPredicted RBP22.48■■□□□ 1.19
PNKP-203ENST00000593946 OR5B17Q8NGF7 314 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 SPAG5Q96R06 1193 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 TRMT13Q9NUP7 481 aaKnown RBP22.48■■□□□ 1.19
PNKP-203ENST00000593946 DNM1LO00429 736 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 B4GALT4O60513 344 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 CHRNA1P02708 482 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 RAPGEF1Q13905 1077 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 TOGARAM2Q6ZUX3 1019 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 FAM228AQ86W67 206 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 CCAR2Q8N163 923 aaKnown RBP22.48■■□□□ 1.19
PNKP-203ENST00000593946 RRAGDQ9NQL2 400 aaPredicted RBP22.48■■□□□ 1.19
PNKP-203ENST00000593946 STARD7Q9NQZ5 370 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 DNAJC12Q9UKB3 198 aa22.48■■□□□ 1.19
PNKP-203ENST00000593946 A0A0U1RQG5 324 aaPredicted RBP22.47■■□□□ 1.19
PNKP-203ENST00000593946 MEFVO15553 781 aaPredicted RBP22.47■■□□□ 1.19
PNKP-203ENST00000593946 NPTXRO95502 500 aa22.47■■□□□ 1.19
PNKP-203ENST00000593946 CCL5P13501 91 aa22.47■■□□□ 1.19
PNKP-203ENST00000593946 GRM5P41594 1212 aa22.47■■□□□ 1.19
PNKP-203ENST00000593946 HGSNATQ68CP4 663 aa22.47■■□□□ 1.19
PNKP-203ENST00000593946 ARHGEF19Q8IW93 802 aa22.47■■□□□ 1.19
PNKP-203ENST00000593946 DHX38Q92620 1227 aaKnown RBP22.47■■□□□ 1.19
PNKP-203ENST00000593946 FAM212AQ96EL1 285 aa22.47■■□□□ 1.19
PNKP-203ENST00000593946 STK33Q9BYT3 514 aa22.47■■□□□ 1.19
PNKP-203ENST00000593946 ARHGAP20Q9P2F6 1191 aa22.47■■□□□ 1.19
PNKP-203ENST00000593946 PIN4Q9Y237 131 aaKnown RBP22.47■■□□□ 1.19
PNKP-203ENST00000593946 NOC2LQ9Y3T9 749 aaKnown RBP22.47■■□□□ 1.19
PNKP-203ENST00000593946 USP27XA6NNY8 438 aa22.46■■□□□ 1.19
PNKP-203ENST00000593946 ZC3H11AO75152 810 aaKnown RBP eCLIP22.46■■□□□ 1.19
PNKP-203ENST00000593946 VNN1O95497 513 aa22.46■■□□□ 1.19
PNKP-203ENST00000593946 CTSHP09668 335 aa22.46■■□□□ 1.19
PNKP-203ENST00000593946 THPOP40225 353 aa22.46■■□□□ 1.19
PNKP-203ENST00000593946 TRIM71Q2Q1W2 868 aaKnown RBP22.46■■□□□ 1.19
PNKP-203ENST00000593946 EFCAB13Q8IY85 973 aa22.46■■□□□ 1.19
PNKP-203ENST00000593946 DEFB118Q96PH6 123 aa22.46■■□□□ 1.19
PNKP-203ENST00000593946 NOD1Q9Y239 953 aa22.46■■□□□ 1.19
PNKP-203ENST00000593946 F8VZ95 297 aa22.45■■□□□ 1.19
PNKP-203ENST00000593946 HLA-DRAP01903 254 aa22.45■■□□□ 1.19
PNKP-203ENST00000593946 BIRC3Q13489 604 aa22.45■■□□□ 1.19
PNKP-203ENST00000593946 SLC10A6Q3KNW5 377 aa22.45■■□□□ 1.19
PNKP-203ENST00000593946 CCDC170Q8IYT3 715 aa22.45■■□□□ 1.19
PNKP-203ENST00000593946 EIF2AQ9BY44 585 aaKnown RBP22.45■■□□□ 1.19
PNKP-203ENST00000593946 GPR88Q9GZN0 384 aa22.45■■□□□ 1.19
PNKP-203ENST00000593946 RNF208Q9H0X6 261 aa22.45■■□□□ 1.19
PNKP-203ENST00000593946 NHEJ1Q9H9Q4 299 aaPredicted RBP22.45■■□□□ 1.19
PNKP-203ENST00000593946 OGDHLQ9ULD0 1010 aa22.45■■□□□ 1.19
PNKP-203ENST00000593946 MROH7Q68CQ1 1323 aa22.45■■□□□ 1.19
PNKP-203ENST00000593946 MYCP01106 439 aaPredicted RBP22.45■■□□□ 1.18
PNKP-203ENST00000593946 PLEKP08567 350 aaPredicted RBP22.45■■□□□ 1.18
PNKP-203ENST00000593946 PIK3CAP42336 1068 aa22.45■■□□□ 1.18
PNKP-203ENST00000593946 DRAP1Q14919 205 aaPredicted RBP22.45■■□□□ 1.18
PNKP-203ENST00000593946 DUOXA2Q1HG44 320 aa22.45■■□□□ 1.18
PNKP-203ENST00000593946 NT5C1BQ96P26 610 aa22.45■■□□□ 1.18
PNKP-203ENST00000593946 ACAP3Q96P50 834 aa22.45■■□□□ 1.18
PNKP-203ENST00000593946 DESI2Q9BSY9 194 aa22.45■■□□□ 1.18
PNKP-203ENST00000593946 MTMR12Q9C0I1 747 aa22.45■■□□□ 1.18
PNKP-203ENST00000593946 ASB7Q9H672 318 aa22.45■■□□□ 1.18
PNKP-203ENST00000593946 UBE2TQ9NPD8 197 aaPredicted RBP22.45■■□□□ 1.18
PNKP-203ENST00000593946 PPP2R2CQ9Y2T4 447 aa22.45■■□□□ 1.18
PNKP-203ENST00000593946 EPN1Q9Y6I3 576 aaPredicted RBP22.45■■□□□ 1.18
PNKP-203ENST00000593946 LACTBL1A8MY62 500 aa22.44■■□□□ 1.18
PNKP-203ENST00000593946 ARVCFO00192 962 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms