RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 PPM1AP35813 382 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 PBX3P40426 434 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 ALDH7A1P49419 539 aaKnown RBP16.26■□□□□ 0.19
DDX39A-221ENST00000593026 BCAR1P56945 870 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 PPP2R3AQ06190 1150 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 DSC1Q08554 894 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 ENOX2Q16206 610 aaKnown RBP16.26■□□□□ 0.19
DDX39A-221ENST00000593026 SLC10A6Q3KNW5 377 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 XKR4Q5GH76 650 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 GLRA4Q5JXX5 417 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 KCNT2Q6UVM3 1135 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 ALKAL1Q6UXT8 129 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 SMYD4Q8IYR2 804 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-221ENST00000593026 GDPD5Q8WTR4 605 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 NOC3LQ8WTT2 800 aaKnown RBP16.26■□□□□ 0.19
DDX39A-221ENST00000593026 P2RX5Q93086 422 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 FAM213AQ9BRX8 229 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 C11orf84Q9BUA3 381 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-221ENST00000593026 KCTD10Q9H3F6 313 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 PLEKHA5Q9HAU0 1116 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 CNTN3Q9P232 1028 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 KIAA1468Q9P260 1216 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 DNAJB4Q9UDY4 337 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 COL4A4P53420 1690 aaPredicted RBP16.25■□□□□ 0.19
DDX39A-221ENST00000593026 SMIM28A0A1B0GU29 152 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 TTC26A0AVF1 554 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 GOLGA8IPA6NC78 632 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 GOLGA8JA6NMD2 632 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 BIN1O00499 593 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 PDXKO00764 312 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 CLIC2O15247 247 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 MEFVO15553 781 aaPredicted RBP16.25■□□□□ 0.19
DDX39A-221ENST00000593026 EXTL3O43909 919 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 B4GALT3O60512 393 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 CYP2J2P51589 502 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 ISM2Q6H9L7 571 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 CRELD2Q6UXH1 353 aaPredicted RBP16.25■□□□□ 0.19
DDX39A-221ENST00000593026 C12orf56Q8IXR9 622 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 COLGALT2Q8IYK4 626 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 GPD1LQ8N335 351 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 KLHL23Q8NBE8 558 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 FAM212AQ96EL1 285 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 PPP1R10Q96QC0 940 aaKnown RBP16.25■□□□□ 0.19
DDX39A-221ENST00000593026 TMEM175Q9BSA9 504 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 HSPBP1Q9NZL4 362 aa16.25■□□□□ 0.19
DDX39A-221ENST00000593026 H3BNC9 293 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 RFXAPO00287 272 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 CALUO43852 315 aaPredicted RBP16.24■□□□□ 0.19
DDX39A-221ENST00000593026 GALTP07902 379 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 KCNE1P15382 129 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 PRCPP42785 496 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 OR1G1P47890 313 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 SLC11A1P49279 550 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 POU5F1Q01860 360 aaKnown RBP16.24■□□□□ 0.19
DDX39A-221ENST00000593026 TUSC3Q13454 348 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 GPM6BQ13491 265 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 STIM1Q13586 685 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 HSP90AA2PQ14568 343 aaPredicted RBP16.24■□□□□ 0.19
DDX39A-221ENST00000593026 COBLL1Q53SF7 1204 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 CD302Q8IX05 232 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 SLC39A11Q8N1S5 342 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 ZSWIM2Q8NEG5 633 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 ZMAT2Q96NC0 199 aaKnown RBP16.24■□□□□ 0.19
DDX39A-221ENST00000593026 SLC38A7Q9NVC3 462 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 SPG21Q9NZD8 308 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 STXBP5LQ9Y2K9 1186 aa16.24■□□□□ 0.19
DDX39A-221ENST00000593026 LACTBL1A8MY62 500 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 NT5C1B-RDH14C9J2C7 533 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 NRP1O14786 923 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 FGF18O76093 207 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 ALDH2P05091 517 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 ITGB1P05556 798 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 ADRB2P07550 413 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 MORC3Q14149 939 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 NAB2Q15742 525 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 BRSK2Q8IWQ3 736 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 TRIML1Q8N9V2 468 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 XXYLT1Q8NBI6 393 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 KIF12Q96FN5 646 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 GUCD1Q96NT3 240 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 GAS2L1Q99501 681 aaPredicted RBP16.23■□□□□ 0.19
DDX39A-221ENST00000593026 CDX2Q99626 313 aaPredicted RBP16.23■□□□□ 0.19
DDX39A-221ENST00000593026 ASB7Q9H672 318 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 KIAA1586Q9HCI6 787 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 ALG13Q9NP73 1137 aaKnown RBP16.23■□□□□ 0.19
DDX39A-221ENST00000593026 RBAKQ9NYW8 714 aaPredicted RBP16.23■□□□□ 0.19
DDX39A-221ENST00000593026 TRAF3IP3Q9Y228 551 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 FAN1Q9Y2M0 1017 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 TRIP11Q15643 1979 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 CHD7Q9P2D1 2997 aa16.23■□□□□ 0.19
DDX39A-221ENST00000593026 CASTOR2A6NHX0 329 aa16.22■□□□□ 0.19
DDX39A-221ENST00000593026 ZNF233A6NK53 670 aa16.22■□□□□ 0.19
DDX39A-221ENST00000593026 TULP1O00294 542 aaPredicted RBP16.22■□□□□ 0.19
DDX39A-221ENST00000593026 EXOC3O60645 756 aa16.22■□□□□ 0.19
DDX39A-221ENST00000593026 IL18RAPO95256 599 aa16.22■□□□□ 0.19
DDX39A-221ENST00000593026 NR3C1P04150 777 aa16.22■□□□□ 0.19
DDX39A-221ENST00000593026 BMP6P22004 513 aa16.22■□□□□ 0.19
DDX39A-221ENST00000593026 PPP1R2P41236 205 aa16.22■□□□□ 0.19
DDX39A-221ENST00000593026 KRT17Q04695 432 aa16.22■□□□□ 0.19
DDX39A-221ENST00000593026 SPAG1Q07617 926 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms