RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 EFHBQ8N7U6 833 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 CEP120Q8N960 986 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 MRPL43Q8N983 215 aaKnown RBP11□□□□□ -0.65
BRCA1-227ENST00000591849 AUTS2Q8WXX7 1259 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 RABGGTAQ92696 567 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 HVCN1Q96D96 273 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 DNAJC19Q96DA6 116 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 CCDC34Q96HJ3 373 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 CHAMP1Q96JM3 812 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 UHRF1Q96T88 793 aaPredicted RBP11□□□□□ -0.65
BRCA1-227ENST00000591849 MSTO1Q9BUK6 570 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 EMILIN2Q9BXX0 1053 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 RPF1Q9H9Y2 349 aaKnown RBP11□□□□□ -0.65
BRCA1-227ENST00000591849 MRPL17Q9NRX2 175 aaKnown RBP11□□□□□ -0.65
BRCA1-227ENST00000591849 USP25Q9UHP3 1055 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 NLRC5Q86WI3 1866 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 SMIM28A0A1B0GU29 152 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 A0A1B0GVL5 298 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 C2orf71A6NGG8 1288 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 HIDE1A8MVS5 230 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 PTGESO14684 152 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 OGTO15294 1046 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 LINC01565O15544 149 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 B4GALT3O60512 393 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 PIGRP01833 764 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 SOD2P04179 222 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 CTSAP10619 480 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 PROZP22891 400 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 SYKP43405 635 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 KCNQ1P51787 676 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 E2F4Q16254 413 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 LEXMQ3ZCV2 418 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 CEP57Q86XR8 500 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 MAP4K3Q8IVH8 894 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 GSTCDQ8NEC7 633 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 NOC3LQ8WTT2 800 aaKnown RBP10.99□□□□□ -0.65
BRCA1-227ENST00000591849 BCL7CQ8WUZ0 217 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-227ENST00000591849 POMGNT1Q8WZA1 660 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 CCDC47Q96A33 483 aaKnown RBP10.99□□□□□ -0.65
BRCA1-227ENST00000591849 UROC1Q96N76 676 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 TRIM9Q9C026 710 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 ZBP1Q9H171 429 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 BLZF1Q9H2G9 400 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 ST6GALNAC4Q9H4F1 302 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 GDPD2Q9HCC8 539 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 KBTBD4Q9NVX7 518 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 SERTAD1Q9UHV2 236 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 CD207Q9UJ71 328 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 ADAM28Q9UKQ2 775 aa10.99□□□□□ -0.65
BRCA1-227ENST00000591849 RALGAPA2Q2PPJ7 1873 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 ANKRD63C9JTQ0 380 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 XPOTO43592 962 aaKnown RBP10.98□□□□□ -0.65
BRCA1-227ENST00000591849 TRAPPC3O43617 180 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 B3GAT3O94766 335 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 SLFN14P0C7P3 912 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 MYBP10242 640 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 PFKFB1P16118 471 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 GLUD2P49448 558 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 PPP2R3AQ06190 1150 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 ELAVL2Q12926 359 aaKnown RBP10.98□□□□□ -0.65
BRCA1-227ENST00000591849 COASYQ13057 564 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 USP41Q3LFD5 358 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 L1TD1Q5T7N2 865 aaKnown RBP10.98□□□□□ -0.65
BRCA1-227ENST00000591849 PTCRAQ6ISU1 281 aaPredicted RBP10.98□□□□□ -0.65
BRCA1-227ENST00000591849 FUT10Q6P4F1 479 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 DCLRE1AQ6PJP8 1040 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 PPFIBP1Q86W92 1011 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 FSIP1Q8NA03 581 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 HASPINQ8TF76 798 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 KIF12Q96FN5 646 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 DDX27Q96GQ7 796 aaKnown RBP10.98□□□□□ -0.65
BRCA1-227ENST00000591849 SNX27Q96L92 541 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 C7orf25Q9BPX7 421 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 HERC2P3Q9BVR0 1158 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 TMEM206Q9H813 350 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 PLEKHA5Q9HAU0 1116 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 OLFML3Q9NRN5 406 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 MARCH5Q9NX47 278 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 CACNG4Q9UBN1 327 aa10.98□□□□□ -0.65
BRCA1-227ENST00000591849 AGO2Q9UKV8 859 aaKnown RBP10.98□□□□□ -0.65
BRCA1-227ENST00000591849 SF3B1O75533 1304 aaKnown RBP eCLIP10.98□□□□□ -0.651e-6■■■■■ 112.6
BRCA1-227ENST00000591849 FNDC1Q4ZHG4 1894 aaPredicted RBP10.98□□□□□ -0.65
BRCA1-227ENST00000591849 A0A0B4J269 797 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 ABLIM1O14639 778 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 CLASP2O75122 1294 aaKnown RBP10.97□□□□□ -0.65
BRCA1-227ENST00000591849 PRPF6O94906 941 aaKnown RBP10.97□□□□□ -0.65
BRCA1-227ENST00000591849 CXCL8P10145 99 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 BMP1P13497 986 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 ACOT2P49753 483 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 PTPN14Q15678 1187 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 CTC1Q2NKJ3 1217 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 SLC10A6Q3KNW5 377 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 FAM26FQ5R3K3 315 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 FAM171A1Q5VUB5 890 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 ELMSAN1Q6PJG2 1045 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 UNC13DQ70J99 1090 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 TAS1R1Q7RTX1 841 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 CD302Q8IX05 232 aa10.97□□□□□ -0.65
BRCA1-227ENST00000591849 RIN2Q8WYP3 895 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-227ENST00000591849 CASP10Q92851 521 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms