RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 CCDC43Q96MW1 224 aaKnown RBP11.51□□□□□ -0.57
VPS4B-207ENST00000591519 GPR62Q9BZJ7 368 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 PLEKHA4Q9H4M7 779 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 WDR6Q9NNW5 1121 aaKnown RBP11.51□□□□□ -0.57
VPS4B-207ENST00000591519 GPRC5CQ9NQ84 441 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.51□□□□□ -0.57
VPS4B-207ENST00000591519 IGSF9Q9P2J2 1179 aa11.51□□□□□ -0.57
VPS4B-207ENST00000591519 MTCL1Q9Y4B5 1905 aaKnown RBP11.5□□□□□ -0.57
VPS4B-207ENST00000591519 F8W810 466 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 C2CD2LO14523 706 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 USO1O60763 962 aaKnown RBP11.5□□□□□ -0.57
VPS4B-207ENST00000591519 NPTXRO95502 500 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 GLUD1P00367 558 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 ATP2B1P20020 1258 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 MLLT3P42568 568 aaPredicted RBP11.5□□□□□ -0.57
VPS4B-207ENST00000591519 USP41Q3LFD5 358 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 FUT10Q6P4F1 479 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 ELMSAN1Q6PJG2 1045 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 CDR2LQ86X02 465 aaPredicted RBP11.5□□□□□ -0.57
VPS4B-207ENST00000591519 C4orf32Q8N8J7 132 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 FBXO18Q8NFZ0 1043 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 C8orf76Q96K31 380 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 APOL6Q9BWW8 343 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 BACH2Q9BYV9 841 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 C2orf40Q9H1Z8 148 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 SMOC2Q9H3U7 446 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 KCNK12Q9HB15 430 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 MAN1C1Q9NR34 630 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 ADAM28Q9UKQ2 775 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 C2orf16Q68DN1 1984 aa11.5□□□□□ -0.57
VPS4B-207ENST00000591519 LRRIQ4A6NIV6 560 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 PROB1E7EW31 1015 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 ACKR2O00590 384 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 TADA2AO75478 443 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 OR52Z1P0C646 297 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 NAMPTP43490 491 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 TRAPPC10P48553 1259 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 TUSC3Q13454 348 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 PDIA5Q14554 519 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 RABEP1Q15276 862 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 ZNF174Q15697 407 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 MAPK6Q16659 721 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 MAEAQ7L5Y9 396 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 ZBTB8OSQ8IWT0 167 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 TMEM105Q8N8V8 129 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 ERMNQ8TAM6 284 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 NXPE3Q969Y0 559 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 ZNF707Q96C28 371 aaPredicted RBP11.49□□□□□ -0.57
VPS4B-207ENST00000591519 ZSCAN31Q96LW9 406 aaPredicted RBP11.49□□□□□ -0.57
VPS4B-207ENST00000591519 TBC1D32Q96NH3 1257 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 NT5C3AQ9H0P0 336 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 ZDHHC7Q9NXF8 308 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 KLK14Q9P0G3 267 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 EPS15L1Q9UBC2 864 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 PARP2Q9UGN5 583 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 PLXNA3P51805 1871 aa11.49□□□□□ -0.57
VPS4B-207ENST00000591519 N4BP3O15049 544 aa11.48□□□□□ -0.57
VPS4B-207ENST00000591519 TGM5O43548 720 aa11.48□□□□□ -0.57
VPS4B-207ENST00000591519 N4BP1O75113 896 aaKnown RBP11.48□□□□□ -0.57
VPS4B-207ENST00000591519 NPR3P17342 541 aa11.48□□□□□ -0.57
VPS4B-207ENST00000591519 HMGN5P82970 282 aaKnown RBP11.48□□□□□ -0.57
VPS4B-207ENST00000591519 GUCY1B3Q02153 619 aa11.48□□□□□ -0.57
VPS4B-207ENST00000591519 CREMQ03060 361 aa11.48□□□□□ -0.57
VPS4B-207ENST00000591519 PRPF4BQ13523 1007 aaKnown RBP11.48□□□□□ -0.57
VPS4B-207ENST00000591519 HSP90AA2PQ14568 343 aaPredicted RBP11.48□□□□□ -0.57
VPS4B-207ENST00000591519 PPP2R5AQ15172 486 aa11.48□□□□□ -0.57
VPS4B-207ENST00000591519 NAB2Q15742 525 aa11.48□□□□□ -0.57
VPS4B-207ENST00000591519 PALB2Q86YC2 1186 aa11.48□□□□□ -0.57
VPS4B-207ENST00000591519 BSNDQ8WZ55 320 aa11.48□□□□□ -0.57
VPS4B-207ENST00000591519 STAMQ92783 540 aa11.48□□□□□ -0.57
VPS4B-207ENST00000591519 CCDC113Q9H0I3 377 aa11.48□□□□□ -0.57
VPS4B-207ENST00000591519 PDZD7Q9H5P4 517 aa11.48□□□□□ -0.57
VPS4B-207ENST00000591519 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.48□□□□□ -0.57
VPS4B-207ENST00000591519 WNT16Q9UBV4 365 aa11.48□□□□□ -0.57
VPS4B-207ENST00000591519 DUSP12Q9UNI6 340 aa11.48□□□□□ -0.57
VPS4B-207ENST00000591519 SF3B1O75533 1304 aaKnown RBP eCLIP11.47□□□□□ -0.57
VPS4B-207ENST00000591519 ARHGEF35A5YM69 484 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 H0Y858 1186 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 PTGESO14684 152 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 RFPL2O75678 378 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 THP07101 528 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 U2AF2P26368 475 aaKnown RBP eCLIP11.47□□□□□ -0.57
VPS4B-207ENST00000591519 EFNA5P52803 228 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 LAPTM4AQ15012 233 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 ECM1Q16610 540 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 TTC38Q5R3I4 469 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 HAUS3Q68CZ6 603 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 NOSTRINQ8IVI9 506 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 SLC44A3Q8N4M1 653 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 DEPTORQ8TB45 409 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 LNX1Q8TBB1 728 aaPredicted RBP11.47□□□□□ -0.57
VPS4B-207ENST00000591519 RIN2Q8WYP3 895 aaPredicted RBP11.47□□□□□ -0.57
VPS4B-207ENST00000591519 PIK3R5Q8WYR1 880 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 SMG7Q92540 1137 aaKnown RBP11.47□□□□□ -0.57
VPS4B-207ENST00000591519 ATOH1Q92858 354 aaPredicted RBP11.47□□□□□ -0.57
VPS4B-207ENST00000591519 B3GALT6Q96L58 329 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 PAAF1Q9BRP4 392 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.47□□□□□ -0.57
VPS4B-207ENST00000591519 SNTG2Q9NY99 539 aa11.47□□□□□ -0.57
VPS4B-207ENST00000591519 CLUHO75153 1309 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms