RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 TBC1D13Q9NVG8 400 aa13.99□□□□□ -0.17
DDX39A-213ENST00000590315 FRMD4BQ9Y2L6 1034 aa13.99□□□□□ -0.17
DDX39A-213ENST00000590315 MRPL42Q9Y6G3 142 aaKnown RBP13.99□□□□□ -0.17
DDX39A-213ENST00000590315 STYXL1Q9Y6J8 313 aa13.99□□□□□ -0.17
DDX39A-213ENST00000590315 ATG2AQ2TAZ0 1938 aa13.99□□□□□ -0.17
DDX39A-213ENST00000590315 SYCE3A1L190 88 aa13.98□□□□□ -0.17
DDX39A-213ENST00000590315 ZNF233A6NK53 670 aa13.98□□□□□ -0.17
DDX39A-213ENST00000590315 THP07101 528 aa13.98□□□□□ -0.17
DDX39A-213ENST00000590315 BMP6P22004 513 aa13.98□□□□□ -0.17
DDX39A-213ENST00000590315 AFF1P51825 1210 aaKnown RBP13.98□□□□□ -0.17
DDX39A-213ENST00000590315 ENOX2Q16206 610 aaKnown RBP13.98□□□□□ -0.17
DDX39A-213ENST00000590315 LRIT3Q3SXY7 679 aa13.98□□□□□ -0.17
DDX39A-213ENST00000590315 COBLL1Q53SF7 1204 aa13.98□□□□□ -0.17
DDX39A-213ENST00000590315 CBWD2Q8IUF1 395 aa13.98□□□□□ -0.17
DDX39A-213ENST00000590315 MLKLQ8NB16 471 aa13.98□□□□□ -0.17
DDX39A-213ENST00000590315 ZNF689Q96CS4 500 aaPredicted RBP13.98□□□□□ -0.17
DDX39A-213ENST00000590315 KIF12Q96FN5 646 aa13.98□□□□□ -0.17
DDX39A-213ENST00000590315 KIAA1586Q9HCI6 787 aa13.98□□□□□ -0.17
DDX39A-213ENST00000590315 AAASQ9NRG9 546 aa13.98□□□□□ -0.17
DDX39A-213ENST00000590315 ANO10Q9NW15 660 aa13.98□□□□□ -0.17
DDX39A-213ENST00000590315 KANSL3Q9P2N6 904 aa13.98□□□□□ -0.17
DDX39A-213ENST00000590315 CPSF3Q9UKF6 684 aaKnown RBP13.98□□□□□ -0.17
DDX39A-213ENST00000590315 MYO9BQ13459 2157 aa13.98□□□□□ -0.17
DDX39A-213ENST00000590315 LINC01553A4QN01 128 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 CASTOR2A6NHX0 329 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 LACTBL1A8MY62 500 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 PPP1R3GB7ZBB8 358 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 CETN3O15182 167 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 XPOTO43592 962 aaKnown RBP13.97□□□□□ -0.17
DDX39A-213ENST00000590315 CSPG5O95196 566 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 LETM1O95202 739 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-213ENST00000590315 IL18RAPO95256 599 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 LAG3P18627 525 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 OR1G1P47890 313 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 LRRC63Q05C16 580 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 ADAM9Q13443 819 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 TMEM132DQ14C87 1099 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 SNRNP35Q16560 246 aaKnown RBP13.97□□□□□ -0.17
DDX39A-213ENST00000590315 SLC10A6Q3KNW5 377 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 ANKRD40Q6AI12 368 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 RBM43Q6ZSC3 357 aaKnown RBP13.97□□□□□ -0.17
DDX39A-213ENST00000590315 CREBRFQ8IUR6 639 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 BRSK2Q8IWQ3 736 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 C12orf56Q8IXR9 622 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 CRIPAKQ8N1N5 446 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 RSPH1Q8WYR4 309 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 EEF2KMTQ96G04 330 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 ZNF558Q96NG5 402 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 FNBP1Q96RU3 617 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 GZF1Q9H116 711 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-213ENST00000590315 CXCL16Q9H2A7 254 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 RC3H2Q9HBD1 1191 aaKnown RBP13.97□□□□□ -0.17
DDX39A-213ENST00000590315 MIOSQ9NXC5 875 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 TRAF3IP3Q9Y228 551 aa13.97□□□□□ -0.17
DDX39A-213ENST00000590315 SOX1O00570 391 aaPredicted RBP13.96□□□□□ -0.17
DDX39A-213ENST00000590315 PTGESO14684 152 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 FAM189A1O60320 539 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 ADRB2P07550 413 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 NFICP08651 508 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 TMEM191BP0C7N4 346 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 DLATP10515 647 aaKnown RBP13.96□□□□□ -0.17
DDX39A-213ENST00000590315 EPB41P11171 864 aaKnown RBP13.96□□□□□ -0.17
DDX39A-213ENST00000590315 KRT13P13646 458 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 PBX3P40426 434 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 CASP4P49662 377 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 PMS1P54277 932 aaKnown RBP13.96□□□□□ -0.17
DDX39A-213ENST00000590315 TFAMQ00059 246 aaKnown RBP13.96□□□□□ -0.17
DDX39A-213ENST00000590315 TYRO3Q06418 890 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 EDRF1Q3B7T1 1238 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 CCDC40Q4G0X9 1142 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 HABP4Q5JVS0 413 aaKnown RBP13.96□□□□□ -0.17
DDX39A-213ENST00000590315 JADE1Q6IE81 842 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 CENPPQ6IPU0 288 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 CRELD2Q6UXH1 353 aaPredicted RBP13.96□□□□□ -0.17
DDX39A-213ENST00000590315 ZNF280BQ86YH2 543 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 FAM186BQ8IYM0 893 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 COLGALT1Q8NBJ5 622 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 SP7Q8TDD2 431 aaPredicted RBP13.96□□□□□ -0.17
DDX39A-213ENST00000590315 ARNTL2Q8WYA1 636 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 CCDC127Q96BQ5 260 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 LRCH3Q96II8 777 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 TGS1Q96RS0 853 aaKnown RBP13.96□□□□□ -0.17
DDX39A-213ENST00000590315 C17orf80Q9BSJ5 609 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 NRDE2Q9H7Z3 1164 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 PLEKHA5Q9HAU0 1116 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 PDE11AQ9HCR9 933 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 SLC38A7Q9NVC3 462 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 CNTN3Q9P232 1028 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 DNAJB4Q9UDY4 337 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 PLAGL2Q9UPG8 496 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 PRG3Q9Y2Y8 225 aaPredicted RBP13.96□□□□□ -0.17
DDX39A-213ENST00000590315 RWDD3Q9Y3V2 267 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 PCDHB12Q9Y5F1 795 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 SCN1AP35498 2009 aa13.96□□□□□ -0.17
DDX39A-213ENST00000590315 SMIM28A0A1B0GU29 152 aa13.95□□□□□ -0.18
DDX39A-213ENST00000590315 TTC26A0AVF1 554 aa13.95□□□□□ -0.18
DDX39A-213ENST00000590315 NT5C1B-RDH14C9J2C7 533 aa13.95□□□□□ -0.18
DDX39A-213ENST00000590315 DDHD2O94830 711 aa13.95□□□□□ -0.18
DDX39A-213ENST00000590315 ARHGEF15O94989 841 aa13.95□□□□□ -0.18
DDX39A-213ENST00000590315 CCDC192P0DO97 292 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms