RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 LIG4P49917 911 aa19.2■□□□□ 0.66
H3F3B-207ENST00000589417 POU5F1Q01860 360 aaKnown RBP19.2■□□□□ 0.66
H3F3B-207ENST00000589417 ZC2HC1CQ53FD0 456 aaPredicted RBP19.2■□□□□ 0.66
H3F3B-207ENST00000589417 HERC4Q5GLZ8 1057 aaPredicted RBP19.2■□□□□ 0.66
H3F3B-207ENST00000589417 PLPP4Q5VZY2 271 aa19.2■□□□□ 0.66
H3F3B-207ENST00000589417 SLC39A4Q6P5W5 647 aa19.2■□□□□ 0.66
H3F3B-207ENST00000589417 CCDC65Q8IXS2 484 aa19.2■□□□□ 0.66
H3F3B-207ENST00000589417 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.2■□□□□ 0.66
H3F3B-207ENST00000589417 MSLNLQ96KJ4 702 aa19.2■□□□□ 0.66
H3F3B-207ENST00000589417 TSPAN18Q96SJ8 248 aa19.2■□□□□ 0.66
H3F3B-207ENST00000589417 HERC2P3Q9BVR0 1158 aa19.2■□□□□ 0.66
H3F3B-207ENST00000589417 MRPL44Q9H9J2 332 aaKnown RBP19.2■□□□□ 0.66
H3F3B-207ENST00000589417 CHST7Q9NS84 486 aa19.2■□□□□ 0.66
H3F3B-207ENST00000589417 CLDND1Q9NY35 253 aa19.2■□□□□ 0.66
H3F3B-207ENST00000589417 USP25Q9UHP3 1055 aa19.2■□□□□ 0.66
H3F3B-207ENST00000589417 PRG3Q9Y2Y8 225 aaPredicted RBP19.2■□□□□ 0.66
H3F3B-207ENST00000589417 PCDHB13Q9Y5F0 798 aa19.2■□□□□ 0.66
H3F3B-207ENST00000589417 A0A1W2PQ27 194 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 A0A1W2PQ64 194 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 A0A1W2PQD8 194 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 TMEM189-UBE2V1I3L0A0 370 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 SLFN14P0C7P3 912 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 HSP90AA2PQ14568 343 aaPredicted RBP19.19■□□□□ 0.66
H3F3B-207ENST00000589417 SLC10A6Q3KNW5 377 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 SLFN12LQ6IEE8 588 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 BICD1Q96G01 975 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 CHAMP1Q96JM3 812 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 UROC1Q96N76 676 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 IGFLR1Q9H665 355 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 SLC38A7Q9NVC3 462 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 CLEC1BQ9P126 229 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 ANKFY1Q9P2R3 1169 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 ADAM28Q9UKQ2 775 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 SSX2IPQ9Y2D8 614 aa19.19■□□□□ 0.66
H3F3B-207ENST00000589417 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.19■□□□□ 0.66
H3F3B-207ENST00000589417 PER2O15055 1255 aa19.18■□□□□ 0.66
H3F3B-207ENST00000589417 OGTO15294 1046 aa19.18■□□□□ 0.66
H3F3B-207ENST00000589417 LINC01565O15544 149 aa19.18■□□□□ 0.66
H3F3B-207ENST00000589417 TBX10O75333 385 aa19.18■□□□□ 0.66
H3F3B-207ENST00000589417 GLP2RO95838 553 aa19.18■□□□□ 0.66
H3F3B-207ENST00000589417 C1RP00736 705 aa19.18■□□□□ 0.66
H3F3B-207ENST00000589417 IDEP14735 1019 aa19.18■□□□□ 0.66
H3F3B-207ENST00000589417 DLX2Q07687 328 aaPredicted RBP19.18■□□□□ 0.66
H3F3B-207ENST00000589417 EHHADHQ08426 723 aa19.18■□□□□ 0.66
H3F3B-207ENST00000589417 COASYQ13057 564 aa19.18■□□□□ 0.66
H3F3B-207ENST00000589417 PTPN14Q15678 1187 aa19.18■□□□□ 0.66
H3F3B-207ENST00000589417 L1TD1Q5T7N2 865 aaKnown RBP19.18■□□□□ 0.66
H3F3B-207ENST00000589417 KIAA0319Q5VV43 1072 aa19.18■□□□□ 0.66
H3F3B-207ENST00000589417 RBM23Q86U06 439 aaKnown RBP19.18■□□□□ 0.66
H3F3B-207ENST00000589417 STAMQ92783 540 aa19.18■□□□□ 0.66
H3F3B-207ENST00000589417 ZMAT2Q96NC0 199 aaKnown RBP19.18■□□□□ 0.66
H3F3B-207ENST00000589417 PAAF1Q9BRP4 392 aa19.18■□□□□ 0.66
H3F3B-207ENST00000589417 ATG2AQ2TAZ0 1938 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 PVALEFA0A1B0GWK0 134 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 TTC26A0AVF1 554 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 GRXCR2A6NFK2 248 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 ACTN4O43707 911 aaKnown RBP19.17■□□□□ 0.66
H3F3B-207ENST00000589417 CSPG5O95196 566 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 KCNQ1P51787 676 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 OSTNP61366 133 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 DSG1Q02413 1049 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 POSTNQ15063 836 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 ZBTB6Q15916 424 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 FUT10Q6P4F1 479 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 DCLRE1AQ6PJP8 1040 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 VN1R2Q8NFZ6 395 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 DDX27Q96GQ7 796 aaKnown RBP19.17■□□□□ 0.66
H3F3B-207ENST00000589417 ACCSQ96QU6 501 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 COL25A1Q9BXS0 654 aaPredicted RBP19.17■□□□□ 0.66
H3F3B-207ENST00000589417 RXFP1Q9HBX9 757 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 EXOC7Q9UPT5 735 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 TTC28Q96AY4 2481 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 MYH11P35749 1972 aa19.17■□□□□ 0.66
H3F3B-207ENST00000589417 CASTOR2A6NHX0 329 aa19.16■□□□□ 0.66
H3F3B-207ENST00000589417 ANKRD63C9JTQ0 380 aa19.16■□□□□ 0.66
H3F3B-207ENST00000589417 F8W810 466 aa19.16■□□□□ 0.66
H3F3B-207ENST00000589417 CLASP2O75122 1294 aaKnown RBP19.16■□□□□ 0.66
H3F3B-207ENST00000589417 TADA2AO75478 443 aa19.16■□□□□ 0.66
H3F3B-207ENST00000589417 MYL1P05976 194 aa19.16■□□□□ 0.66
H3F3B-207ENST00000589417 PFKFB1P16118 471 aa19.16■□□□□ 0.66
H3F3B-207ENST00000589417 ADSSP30520 456 aa19.16■□□□□ 0.66
H3F3B-207ENST00000589417 RPL9P32969 192 aaKnown RBP19.16■□□□□ 0.66
H3F3B-207ENST00000589417 CASP5P51878 434 aa19.16■□□□□ 0.66
H3F3B-207ENST00000589417 UPP1Q16831 310 aa19.16■□□□□ 0.66
H3F3B-207ENST00000589417 UNC13DQ70J99 1090 aa19.16■□□□□ 0.66
H3F3B-207ENST00000589417 TAS1R1Q7RTX1 841 aa19.16■□□□□ 0.66
H3F3B-207ENST00000589417 CD302Q8IX05 232 aa19.16■□□□□ 0.66
H3F3B-207ENST00000589417 GPR62Q9BZJ7 368 aa19.16■□□□□ 0.66
H3F3B-207ENST00000589417 TMEM206Q9H813 350 aa19.16■□□□□ 0.66
H3F3B-207ENST00000589417 MRPL17Q9NRX2 175 aaKnown RBP19.16■□□□□ 0.66
H3F3B-207ENST00000589417 CPSF3Q9UKF6 684 aaKnown RBP19.16■□□□□ 0.66
H3F3B-207ENST00000589417 CIZ1Q9ULV3 898 aaPredicted RBP19.16■□□□□ 0.66
H3F3B-207ENST00000589417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.15■□□□□ 0.66
H3F3B-207ENST00000589417 A0A1B0GVL5 298 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 H3BQ06 376 aaPredicted RBP19.15■□□□□ 0.66
H3F3B-207ENST00000589417 GCNT3O95395 438 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 HARSP12081 509 aaKnown RBP19.15■□□□□ 0.66
H3F3B-207ENST00000589417 KCNA1Q09470 495 aa19.15■□□□□ 0.66
H3F3B-207ENST00000589417 ELAVL2Q12926 359 aaKnown RBP19.15■□□□□ 0.66
H3F3B-207ENST00000589417 USP41Q3LFD5 358 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms