RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 EPHB6O15197 1021 aa24.11■■□□□ 1.45
ATG4D-209ENST00000588857 NPTXRO95502 500 aa24.11■■□□□ 1.45
ATG4D-209ENST00000588857 COL6A1P12109 1028 aa24.11■■□□□ 1.45
ATG4D-209ENST00000588857 ZBED6P86452 979 aa24.11■■□□□ 1.45
ATG4D-209ENST00000588857 TRIM71Q2Q1W2 868 aaKnown RBP24.11■■□□□ 1.45
ATG4D-209ENST00000588857 TRIM65Q6PJ69 517 aa24.11■■□□□ 1.45
ATG4D-209ENST00000588857 FAM228AQ86W67 206 aa24.11■■□□□ 1.45
ATG4D-209ENST00000588857 CCDC112Q8NEF3 446 aa24.11■■□□□ 1.45
ATG4D-209ENST00000588857 CGRRF1Q99675 332 aa24.11■■□□□ 1.45
ATG4D-209ENST00000588857 TRIM6Q9C030 488 aaPredicted RBP24.11■■□□□ 1.45
ATG4D-209ENST00000588857 INTS2Q9H0H0 1204 aaKnown RBP24.11■■□□□ 1.45
ATG4D-209ENST00000588857 TOPORSQ9NS56 1045 aaPredicted RBP24.11■■□□□ 1.45
ATG4D-209ENST00000588857 CEP72Q9P209 647 aa24.11■■□□□ 1.45
ATG4D-209ENST00000588857 IL18RAPO95256 599 aa24.1■■□□□ 1.45
ATG4D-209ENST00000588857 ACTN1P12814 892 aa24.1■■□□□ 1.45
ATG4D-209ENST00000588857 CDK7P50613 346 aa24.1■■□□□ 1.45
ATG4D-209ENST00000588857 POU5F1Q01860 360 aaKnown RBP24.1■■□□□ 1.45
ATG4D-209ENST00000588857 ENOX2Q16206 610 aaKnown RBP24.1■■□□□ 1.45
ATG4D-209ENST00000588857 EHBP1Q8NDI1 1231 aa24.1■■□□□ 1.45
ATG4D-209ENST00000588857 OR8K1Q8NGG5 319 aa24.1■■□□□ 1.45
ATG4D-209ENST00000588857 ABHD10Q9NUJ1 306 aa24.1■■□□□ 1.45
ATG4D-209ENST00000588857 GPR182O15218 404 aa24.09■■□□□ 1.45
ATG4D-209ENST00000588857 NOL4O94818 638 aa24.09■■□□□ 1.45
ATG4D-209ENST00000588857 SKILP12757 684 aa24.09■■□□□ 1.45
ATG4D-209ENST00000588857 AP3M2P53677 418 aa24.09■■□□□ 1.45
ATG4D-209ENST00000588857 WNT7BP56706 349 aa24.09■■□□□ 1.45
ATG4D-209ENST00000588857 POLR2FP61218 127 aaKnown RBP24.09■■□□□ 1.45
ATG4D-209ENST00000588857 FAM26DQ5JW98 314 aa24.09■■□□□ 1.45
ATG4D-209ENST00000588857 KLHDC7AQ5VTJ3 777 aa24.09■■□□□ 1.45
ATG4D-209ENST00000588857 SV2AQ7L0J3 742 aa24.09■■□□□ 1.45
ATG4D-209ENST00000588857 ACAP3Q96P50 834 aa24.09■■□□□ 1.45
ATG4D-209ENST00000588857 CCDC94Q9BW85 323 aaPredicted RBP24.09■■□□□ 1.45
ATG4D-209ENST00000588857 ZKSCAN5Q9Y2L8 839 aa24.09■■□□□ 1.45
ATG4D-209ENST00000588857 CXCL8P10145 99 aa24.08■■□□□ 1.45
ATG4D-209ENST00000588857 GRM5P41594 1212 aa24.08■■□□□ 1.45
ATG4D-209ENST00000588857 NFX1Q12986 1120 aaKnown RBP24.08■■□□□ 1.45
ATG4D-209ENST00000588857 EPC2Q52LR7 807 aa24.08■■□□□ 1.45
ATG4D-209ENST00000588857 LMBRD2Q68DH5 695 aaPredicted RBP24.08■■□□□ 1.45
ATG4D-209ENST00000588857 WDR49Q8IV35 697 aa24.08■■□□□ 1.45
ATG4D-209ENST00000588857 TMEM192Q8IY95 271 aa24.08■■□□□ 1.45
ATG4D-209ENST00000588857 ZNF516Q92618 1163 aa24.08■■□□□ 1.45
ATG4D-209ENST00000588857 BAG1Q99933 345 aaPredicted RBP24.08■■□□□ 1.45
ATG4D-209ENST00000588857 GANQ9H2C0 597 aa24.08■■□□□ 1.45
ATG4D-209ENST00000588857 ST3GAL5Q9UNP4 418 aa24.08■■□□□ 1.45
ATG4D-209ENST00000588857 CKBP12277 381 aa24.08■■□□□ 1.44
ATG4D-209ENST00000588857 CCZ1BP86790 482 aa24.08■■□□□ 1.44
ATG4D-209ENST00000588857 CCZ1P86791 482 aaPredicted RBP24.08■■□□□ 1.44
ATG4D-209ENST00000588857 APBA1Q02410 837 aa24.08■■□□□ 1.44
ATG4D-209ENST00000588857 ZNF618Q5T7W0 954 aa24.08■■□□□ 1.44
ATG4D-209ENST00000588857 FBXL13Q8NEE6 735 aa24.08■■□□□ 1.44
ATG4D-209ENST00000588857 DNAJC7Q99615 494 aa24.08■■□□□ 1.44
ATG4D-209ENST00000588857 EIF2AQ9BY44 585 aaKnown RBP24.08■■□□□ 1.44
ATG4D-209ENST00000588857 NLRC4Q9NPP4 1024 aa24.08■■□□□ 1.44
ATG4D-209ENST00000588857 ZNHIT6Q9NWK9 470 aaKnown RBP24.08■■□□□ 1.44
ATG4D-209ENST00000588857 COQ4Q9Y3A0 265 aa24.08■■□□□ 1.44
ATG4D-209ENST00000588857 NR2E3Q9Y5X4 410 aa24.08■■□□□ 1.44
ATG4D-209ENST00000588857 TRIP11Q15643 1979 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 MROH7Q68CQ1 1323 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 EVI5O60447 810 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 UCHL3P15374 230 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 BIRC3Q13489 604 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 ZACNQ401N2 412 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 FBXO47Q5MNV8 452 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 DPY19L2P1Q6NXN4 242 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 C15orf39Q6ZRI6 1047 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 RRAGAQ7L523 313 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 ZSCAN30Q86W11 494 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 NAA15Q9BXJ9 866 aaKnown RBP24.07■■□□□ 1.44
ATG4D-209ENST00000588857 NUCKS1Q9H1E3 243 aaKnown RBP24.07■■□□□ 1.44
ATG4D-209ENST00000588857 TMX1Q9H3N1 280 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 SIX2Q9NPC8 291 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 CHST12Q9NRB3 414 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 FBXL5Q9UKA1 691 aa24.07■■□□□ 1.44
ATG4D-209ENST00000588857 PTPRJQ12913 1337 aa24.06■■□□□ 1.44
ATG4D-209ENST00000588857 GHRP10912 638 aa24.06■■□□□ 1.44
ATG4D-209ENST00000588857 PAK2Q13177 524 aa24.06■■□□□ 1.44
ATG4D-209ENST00000588857 DUOXA2Q1HG44 320 aa24.06■■□□□ 1.44
ATG4D-209ENST00000588857 TWF2Q6IBS0 349 aaKnown RBP24.06■■□□□ 1.44
ATG4D-209ENST00000588857 FAM126BQ8IXS8 530 aa24.06■■□□□ 1.44
ATG4D-209ENST00000588857 USP38Q8NB14 1042 aa24.06■■□□□ 1.44
ATG4D-209ENST00000588857 LMO3Q8TAP4 145 aa24.06■■□□□ 1.44
ATG4D-209ENST00000588857 CAGE1Q8TC20 777 aa24.06■■□□□ 1.44
ATG4D-209ENST00000588857 ASB7Q9H672 318 aa24.06■■□□□ 1.44
ATG4D-209ENST00000588857 RAB20Q9NX57 234 aa24.06■■□□□ 1.44
ATG4D-209ENST00000588857 APEX2Q9UBZ4 518 aa24.06■■□□□ 1.44
ATG4D-209ENST00000588857 DAAM1Q9Y4D1 1078 aa24.06■■□□□ 1.44
ATG4D-209ENST00000588857 SQORQ9Y6N5 450 aa24.06■■□□□ 1.44
ATG4D-209ENST00000588857 RALGAPA2Q2PPJ7 1873 aa24.06■■□□□ 1.44
ATG4D-209ENST00000588857 H0YGN5 161 aa24.05■■□□□ 1.44
ATG4D-209ENST00000588857 TLR3O15455 904 aaKnown RBP24.05■■□□□ 1.44
ATG4D-209ENST00000588857 PHACTR2O75167 634 aa24.05■■□□□ 1.44
ATG4D-209ENST00000588857 C4BPAP04003 597 aaKnown RBP24.05■■□□□ 1.44
ATG4D-209ENST00000588857 YARSP54577 528 aaKnown RBP24.05■■□□□ 1.44
ATG4D-209ENST00000588857 TDRD10Q5VZ19 366 aaKnown RBP24.05■■□□□ 1.44
ATG4D-209ENST00000588857 OR5B17Q8NGF7 314 aa24.05■■□□□ 1.44
ATG4D-209ENST00000588857 TAS1R2Q8TE23 839 aa24.05■■□□□ 1.44
ATG4D-209ENST00000588857 BAP1Q92560 729 aa24.05■■□□□ 1.44
ATG4D-209ENST00000588857 LACTBL1A8MY62 500 aa24.04■■□□□ 1.44
ATG4D-209ENST00000588857 TNNC2P02585 160 aa24.04■■□□□ 1.44
ATG4D-209ENST00000588857 RFX1P22670 979 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms