RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 C4orf19Q8IY42 314 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 TSEN2Q8NCE0 465 aaKnown RBP15.81■□□□□ 0.12
CCDC43-203ENST00000588210 DYDC2Q96IM9 177 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 LXNQ9BS40 222 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 PLCB1Q9NQ66 1216 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 RGL1Q9NZL6 768 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 TRAF3IP3Q9Y228 551 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 STK24Q9Y6E0 443 aa15.81■□□□□ 0.12
CCDC43-203ENST00000588210 PITPNM1O00562 1244 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 HSF2BPO75031 334 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 NR2F2P24468 414 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 ITGB8P26012 769 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 MRPS25P82663 173 aaKnown RBP15.8■□□□□ 0.12
CCDC43-203ENST00000588210 KCNH2Q12809 1159 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 DPY19L2P1Q6NXN4 242 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 POTEGQ6S5H5 508 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 ERMNQ8TAM6 284 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 HINFPQ9BQA5 517 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 NIFKQ9BYG3 293 aaKnown RBP15.8■□□□□ 0.12
CCDC43-203ENST00000588210 PPP1R12CQ9BZL4 782 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 TRIP12Q14669 1992 aaPredicted RBP15.8■□□□□ 0.12
CCDC43-203ENST00000588210 LOXHD1Q8IVV2 1947 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 STBD1O95210 358 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 APBA1Q02410 837 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 CYP4A11Q02928 519 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 PAK2Q13177 524 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 CTTNQ14247 550 aaKnown RBP15.8■□□□□ 0.12
CCDC43-203ENST00000588210 TAF2Q6P1X5 1199 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 EPM2AIP1Q7L775 607 aaPredicted RBP15.8■□□□□ 0.12
CCDC43-203ENST00000588210 TPH2Q8IWU9 490 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 LBHD1Q9BQE6 289 aaPredicted RBP15.8■□□□□ 0.12
CCDC43-203ENST00000588210 POLR3CQ9BUI4 534 aaPredicted RBP15.8■□□□□ 0.12
CCDC43-203ENST00000588210 TUFT1Q9NNX1 390 aa15.8■□□□□ 0.12
CCDC43-203ENST00000588210 ZBTB42B2RXF5 422 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 TRIM66O15016 1216 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 LYPLA2O95372 231 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 FTCDO95954 541 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 RPLP2P05387 115 aaKnown RBP15.79■□□□□ 0.12
CCDC43-203ENST00000588210 GIT2Q14161 759 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 MFSD5Q6N075 450 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 MTHFD1LQ6UB35 978 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 MREGQ8N565 214 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 DHX38Q92620 1227 aaKnown RBP15.79■□□□□ 0.12
CCDC43-203ENST00000588210 RUFY1Q96T51 708 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCDC43-203ENST00000588210 WRAP73Q9P2S5 460 aaPredicted RBP15.79■□□□□ 0.12
CCDC43-203ENST00000588210 RSPH14Q9UHP6 348 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 BZW2Q9Y6E2 419 aaKnown RBP15.79■□□□□ 0.12
CCDC43-203ENST00000588210 CAND2O75155 1236 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 HEXIM1O94992 359 aaKnown RBP15.79■□□□□ 0.12
CCDC43-203ENST00000588210 GLI1P08151 1106 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 MUTP22033 750 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 ANXA13P27216 316 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 RPA1P27694 616 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 CASP5P51878 434 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 BMT2Q1RMZ1 405 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 ANO5Q75V66 913 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 OTUD6AQ7L8S5 288 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 RPAINQ86UA6 219 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 CATSPER3Q86XQ3 398 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 C10orf67Q8IYJ2 551 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 TMEM199Q8N511 208 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 SYT2Q8N9I0 419 aaPredicted RBP15.79■□□□□ 0.12
CCDC43-203ENST00000588210 TRAPPC12Q8WVT3 735 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 BADQ92934 168 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 PACSIN1Q9BY11 444 aa15.79■□□□□ 0.12
CCDC43-203ENST00000588210 ARMCX3Q9UH62 379 aaPredicted RBP15.79■□□□□ 0.12
CCDC43-203ENST00000588210 SEPT9Q9UHD8 586 aaPredicted RBP15.79■□□□□ 0.12
CCDC43-203ENST00000588210 MAGEB2O15479 319 aa15.78■□□□□ 0.12
CCDC43-203ENST00000588210 CALUO43852 315 aaPredicted RBP15.78■□□□□ 0.12
CCDC43-203ENST00000588210 AFPP02771 609 aaKnown RBP15.78■□□□□ 0.12
CCDC43-203ENST00000588210 SPATA31C1P0DKV0 1188 aa15.78■□□□□ 0.12
CCDC43-203ENST00000588210 CKBP12277 381 aa15.78■□□□□ 0.12
CCDC43-203ENST00000588210 YWHABP31946 246 aaKnown RBP15.78■□□□□ 0.12
CCDC43-203ENST00000588210 CYP2C18P33260 490 aa15.78■□□□□ 0.12
CCDC43-203ENST00000588210 IRAK1P51617 712 aa15.78■□□□□ 0.12
CCDC43-203ENST00000588210 SKOR1P84550 965 aa15.78■□□□□ 0.12
CCDC43-203ENST00000588210 ARID5AQ03989 594 aa15.78■□□□□ 0.12
CCDC43-203ENST00000588210 TARBP2Q15633 366 aaKnown RBP15.78■□□□□ 0.12
CCDC43-203ENST00000588210 KNOP1Q1ED39 458 aaKnown RBP15.78■□□□□ 0.12
CCDC43-203ENST00000588210 TRIM71Q2Q1W2 868 aaKnown RBP15.78■□□□□ 0.12
CCDC43-203ENST00000588210 PRPF38BQ5VTL8 546 aaKnown RBP15.78■□□□□ 0.12
CCDC43-203ENST00000588210 IRF2BP2Q7Z5L9 587 aa15.78■□□□□ 0.12
CCDC43-203ENST00000588210 REEP2Q9BRK0 252 aa15.78■□□□□ 0.12
CCDC43-203ENST00000588210 ADAMTS1Q9UHI8 967 aa15.78■□□□□ 0.12
CCDC43-203ENST00000588210 PPME1Q9Y570 386 aa15.78■□□□□ 0.12
CCDC43-203ENST00000588210 LTBP2Q14767 1821 aa15.78■□□□□ 0.12
CCDC43-203ENST00000588210 UMODL1Q5DID0 1318 aa15.78■□□□□ 0.12
CCDC43-203ENST00000588210 SMIM35A0A1B0GVV1 85 aa15.77■□□□□ 0.12
CCDC43-203ENST00000588210 PDXKO00764 312 aa15.77■□□□□ 0.12
CCDC43-203ENST00000588210 PRKCIP41743 596 aa15.77■□□□□ 0.12
CCDC43-203ENST00000588210 TTMPQ5BVD1 217 aa15.77■□□□□ 0.12
CCDC43-203ENST00000588210 SFR1Q86XK3 245 aa15.77■□□□□ 0.12
CCDC43-203ENST00000588210 WNT8BQ93098 351 aa15.77■□□□□ 0.12
CCDC43-203ENST00000588210 CAPS2Q9BXY5 557 aa15.77■□□□□ 0.12
CCDC43-203ENST00000588210 WNT8AQ9H1J5 351 aa15.77■□□□□ 0.12
CCDC43-203ENST00000588210 ZHX3Q9H4I2 956 aa15.77■□□□□ 0.12
CCDC43-203ENST00000588210 TMEM59LQ9UK28 342 aa15.77■□□□□ 0.12
CCDC43-203ENST00000588210 FBXL5Q9UKA1 691 aa15.77■□□□□ 0.12
CCDC43-203ENST00000588210 MYH11P35749 1972 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms