RNA–Protein interactions for RNA: ENST00000587215.1

PKN1-209, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 363 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-209ENST00000587215 SF3B1O75533 1304 aaKnown RBP eCLIP18.23■□□□□ 0.51
PKN1-209ENST00000587215 ALKAL1Q6UXT8 129 aa18.22■□□□□ 0.51
PKN1-209ENST00000587215 CEP120Q8N960 986 aa18.22■□□□□ 0.51
PKN1-209ENST00000587215 TTPALQ9BTX7 342 aa18.22■□□□□ 0.51
PKN1-209ENST00000587215 TARS2Q9BW92 718 aaKnown RBP18.22■□□□□ 0.51
PKN1-209ENST00000587215 KMT5AQ9NQR1 393 aa18.22■□□□□ 0.51
PKN1-209ENST00000587215 ARHGAP28Q9P2N2 729 aa18.22■□□□□ 0.51
PKN1-209ENST00000587215 RBM19Q9Y4C8 960 aaKnown RBP18.22■□□□□ 0.51
PKN1-209ENST00000587215 DENND4AQ7Z401 1863 aa18.22■□□□□ 0.51
PKN1-209ENST00000587215 C2orf16Q68DN1 1984 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 H3BQV1 296 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 GUCY2CP25092 1073 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 TCF15Q12870 199 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 DMP1Q13316 513 aaPredicted RBP18.21■□□□□ 0.51
PKN1-209ENST00000587215 ZRSR1Q15695 479 aaKnown RBP18.21■□□□□ 0.51
PKN1-209ENST00000587215 XKR4Q5GH76 650 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 GLRA4Q5JXX5 417 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 ELMSAN1Q6PJG2 1045 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 DCLRE1AQ6PJP8 1040 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 CEP57Q86XR8 500 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 SYT2Q8N9I0 419 aaPredicted RBP18.21■□□□□ 0.51
PKN1-209ENST00000587215 PIK3R5Q8WYR1 880 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 SMG7Q92540 1137 aaKnown RBP18.21■□□□□ 0.51
PKN1-209ENST00000587215 DRC1Q96MC2 740 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 PLIN2Q99541 437 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 PRKD2Q9BZL6 878 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 CDT1Q9H211 546 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 C17orf75Q9HAS0 396 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 KCNK12Q9HB15 430 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 PHLPP2Q6ZVD8 1323 aa18.21■□□□□ 0.51
PKN1-209ENST00000587215 SMIM28A0A1B0GU29 152 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 VWA3AA6NCI4 1184 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 ABLIM1O14639 778 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 SLC16A4O15374 487 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 ADAM12O43184 909 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 PROZP22891 400 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 GRM5P41594 1212 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 MCM2P49736 904 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 CLCNKBP51801 687 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 SLC12A3P55017 1021 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 CREMQ03060 361 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 LARP1BQ659C4 914 aaKnown RBP18.2■□□□□ 0.5
PKN1-209ENST00000587215 TBC1D32Q96NH3 1257 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 PRRX2Q99811 253 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 MRPL4Q9BYD3 311 aaKnown RBP18.2■□□□□ 0.5
PKN1-209ENST00000587215 ZDHHC7Q9NXF8 308 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 SMC3Q9UQE7 1217 aa18.2■□□□□ 0.5
PKN1-209ENST00000587215 TMEM189-UBE2V1I3L0A0 370 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 ZMYND10O75800 440 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 FGFR3P22607 806 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 OSTNP61366 133 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 RAD51AP2Q09MP3 1159 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 ELAVL2Q12926 359 aaKnown RBP18.19■□□□□ 0.5
PKN1-209ENST00000587215 TDGQ13569 410 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 PSMD5Q16401 504 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 UPP1Q16831 310 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 ARL6IP4Q66PJ3 421 aaKnown RBP18.19■□□□□ 0.5
PKN1-209ENST00000587215 APBB1IPQ7Z5R6 666 aaPredicted RBP18.19■□□□□ 0.5
PKN1-209ENST00000587215 KCTD17Q8N5Z5 321 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 SPIRE2Q8WWL2 714 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 ZBTB45Q96K62 511 aaPredicted RBP18.19■□□□□ 0.5
PKN1-209ENST00000587215 ZMAT2Q96NC0 199 aaKnown RBP18.19■□□□□ 0.5
PKN1-209ENST00000587215 MYADMQ96S97 322 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 PHOX2BQ99453 314 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 TIPINQ9BVW5 301 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 UPF2Q9HAU5 1272 aaKnown RBP18.19■□□□□ 0.5
PKN1-209ENST00000587215 GOLGA2P5Q9HBQ8 144 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 CLUHO75153 1309 aa18.19■□□□□ 0.5
PKN1-209ENST00000587215 MTCL1Q9Y4B5 1905 aaKnown RBP18.18■□□□□ 0.5
PKN1-209ENST00000587215 MEFVO15553 781 aaPredicted RBP18.18■□□□□ 0.5
PKN1-209ENST00000587215 B3GAT3O94766 335 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 PLA2G4BP0C869 781 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 PLS3P13797 630 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 GBP2P32456 591 aaPredicted RBP18.18■□□□□ 0.5
PKN1-209ENST00000587215 MRE11P49959 708 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 PTPN5P54829 565 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 SOX4Q06945 474 aaPredicted RBP18.18■□□□□ 0.5
PKN1-209ENST00000587215 ZNF568Q3ZCX4 644 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 TMEM119Q4V9L6 283 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 ARSHQ5FYA8 562 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 RSPO2Q6UXX9 243 aaPredicted RBP18.18■□□□□ 0.5
PKN1-209ENST00000587215 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.18■□□□□ 0.5
PKN1-209ENST00000587215 C3orf58Q8NDZ4 430 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 TMEM161BQ8NDZ6 487 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 RSAD2Q8WXG1 361 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 STAMQ92783 540 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 TCHPQ9BT92 498 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 CCDC94Q9BW85 323 aaPredicted RBP18.18■□□□□ 0.5
PKN1-209ENST00000587215 PIDD1Q9HB75 910 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 IGSF9Q9P2J2 1179 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 EPS15L1Q9UBC2 864 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 FBXW11Q9UKB1 542 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 KMT2EQ8IZD2 1858 aa18.18■□□□□ 0.5
PKN1-209ENST00000587215 NPHP3-ACAD11A0A0J9YXS1 232 aa18.17■□□□□ 0.5
PKN1-209ENST00000587215 MCF2P10911 925 aa18.17■□□□□ 0.5
PKN1-209ENST00000587215 YARSP54577 528 aaKnown RBP18.17■□□□□ 0.5
PKN1-209ENST00000587215 MPZL3Q6UWV2 235 aa18.17■□□□□ 0.5
PKN1-209ENST00000587215 TMEM105Q8N8V8 129 aa18.17■□□□□ 0.5
PKN1-209ENST00000587215 LRRC15Q8TF66 581 aa18.17■□□□□ 0.5
PKN1-209ENST00000587215 UROC1Q96N76 676 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms