RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 SURF1Q15526 300 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 ENOX2Q16206 610 aaKnown RBP15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 SNRNP35Q16560 246 aaKnown RBP15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 ZCWPW2Q504Y3 356 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 CEP135Q66GS9 1140 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 FOXR2Q6PJQ5 311 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 USP37Q86T82 979 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 BRSK2Q8IWQ3 736 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 TMEM192Q8IY95 271 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 SP7Q8TDD2 431 aaPredicted RBP15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 FAM212AQ96EL1 285 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 ZFP42Q96MM3 310 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 PBX4Q9BYU1 374 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 ASB7Q9H672 318 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 RC3H2Q9HBD1 1191 aaKnown RBP15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 RWDD2AQ9UIY3 292 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 COL4A6Q14031 1691 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 POMCP01189 267 aa15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 THP07101 528 aa15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 KCNE1P15382 129 aa15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 LAG3P18627 525 aa15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 ERCC5P28715 1186 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 ADAM9Q13443 819 aa15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 TPD52L1Q16890 204 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 SLC10A6Q3KNW5 377 aa15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 DPCR1Q3MIW9 517 aa15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 ZBTB41Q5SVQ8 909 aa15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 ANKRD40Q6AI12 368 aa15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 FBXL18Q96ME1 805 aa15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 NAT10Q9H0A0 1025 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 SLC28A3Q9HAS3 691 aa15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 TBC1D13Q9NVG8 400 aa15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 DMAC2Q9NW81 257 aa15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 CNTN3Q9P232 1028 aa15.85■□□□□ 0.13
SCAMP4-209ENST00000585335 TTC26A0AVF1 554 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 CA3P07451 260 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 EPB41P11171 864 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 DNAJB2P25686 324 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 PSMC2P35998 433 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 TYRO3Q06418 890 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 XKR4Q5GH76 650 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 PPP2R2DQ66LE6 453 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 CRELD2Q6UXH1 353 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 CBWD2Q8IUF1 395 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 RDH13Q8NBN7 331 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 TIFAQ96CG3 184 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 KIF12Q96FN5 646 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 CEP63Q96MT8 703 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 SAMD11Q96NU1 681 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 FNBP1Q96RU3 617 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 NKX2-4Q9H2Z4 354 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 DERAQ9Y315 318 aa15.84■□□□□ 0.13
SCAMP4-209ENST00000585335 RALGAPA2Q2PPJ7 1873 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 FNDC1Q4ZHG4 1894 aaPredicted RBP15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 SMIM28A0A1B0GU29 152 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 TRIM49BA6NDI0 452 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 LACTBL1A8MY62 500 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 MAPK13O15264 365 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 ZC3H11AO75152 810 aaKnown RBP eCLIP15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 KRT13P13646 458 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 MYOGP15173 224 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 PBX2P40425 430 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 ALDH7A1P49419 539 aaKnown RBP15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 STX17P56962 302 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 CYP24A1Q07973 514 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 TMEM132DQ14C87 1099 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 GLRA4Q5JXX5 417 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 TTI2Q6NXR4 508 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 ALKAL1Q6UXT8 129 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 NT5DC4Q86YG4 428 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 FAM186BQ8IYM0 893 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 CSGALNACT2Q8N6G5 542 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 BEST2Q8NFU1 509 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 CACTINQ8WUQ7 758 aaKnown RBP15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 ZNF558Q96NG5 402 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 TGS1Q96RS0 853 aaKnown RBP15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 MKNK1Q9BUB5 465 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 YBX2Q9Y2T7 364 aaKnown RBP15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 C2CD2Q9Y426 696 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 PCDHB12Q9Y5F1 795 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 MRPL42Q9Y6G3 142 aaKnown RBP15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 CITO14578 2027 aa15.83■□□□□ 0.12
SCAMP4-209ENST00000585335 SYCE3A1L190 88 aa15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 LCHNA4D1U4 455 aa15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 LINC01553A4QN01 128 aa15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 PTGESO14684 152 aa15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 SLC16A3O15427 465 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 ADRB2P07550 413 aa15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 PMS1P54277 932 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 TUSC3Q13454 348 aa15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 PSMD6Q15008 389 aa15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 ZSCAN23Q3MJ62 389 aa15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 INTS8Q75QN2 995 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 ZSWIM2Q8NEG5 633 aa15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 UROC1Q96N76 676 aa15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 PPP1R10Q96QC0 940 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 TMEM175Q9BSA9 504 aa15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 UBQLN1Q9UMX0 589 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-209ENST00000585335 TMEM265A0A087WTH1 108 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 GNA14O95837 355 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms