RNA–Protein interactions for RNA: ENST00000584243.5

GGA3-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-218ENST00000584243 CENPPQ6IPU0 288 aa8.82□□□□□ -1
GGA3-218ENST00000584243 TMEM179Q6ZVK1 233 aa8.82□□□□□ -1
GGA3-218ENST00000584243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.82□□□□□ -1
GGA3-218ENST00000584243 CTAGE6Q86UF2 777 aa8.82□□□□□ -1
GGA3-218ENST00000584243 CTAGE4Q8IX94 777 aa8.82□□□□□ -1
GGA3-218ENST00000584243 CCDC65Q8IXS2 484 aa8.82□□□□□ -1
GGA3-218ENST00000584243 GRAMD1CQ8IYS0 662 aa8.82□□□□□ -1
GGA3-218ENST00000584243 PLCD3Q8N3E9 789 aa8.82□□□□□ -1
GGA3-218ENST00000584243 GMCL1P1Q8NEA9 526 aa8.82□□□□□ -1
GGA3-218ENST00000584243 TRIM58Q8NG06 486 aa8.82□□□□□ -1
GGA3-218ENST00000584243 TBCKQ8TEA7 893 aa8.82□□□□□ -1
GGA3-218ENST00000584243 GPKOWQ92917 476 aaPredicted RBP eCLIP8.82□□□□□ -1
GGA3-218ENST00000584243 KIFC2Q96AC6 838 aa8.82□□□□□ -1
GGA3-218ENST00000584243 ZNF689Q96CS4 500 aaPredicted RBP8.82□□□□□ -1
GGA3-218ENST00000584243 MTMR8Q96EF0 704 aa8.82□□□□□ -1
GGA3-218ENST00000584243 GMCL1Q96IK5 515 aa8.82□□□□□ -1
GGA3-218ENST00000584243 CALR3Q96L12 384 aaKnown RBP8.82□□□□□ -1
GGA3-218ENST00000584243 ALS2CR12Q96Q35 445 aa8.82□□□□□ -1
GGA3-218ENST00000584243 MTMR9Q96QG7 549 aa8.82□□□□□ -1
GGA3-218ENST00000584243 UBL7Q96S82 380 aaPredicted RBP8.82□□□□□ -1
GGA3-218ENST00000584243 EIF3CQ99613 913 aaKnown RBP8.82□□□□□ -1
GGA3-218ENST00000584243 CDCA3Q99618 268 aaPredicted RBP8.82□□□□□ -1
GGA3-218ENST00000584243 TUBGCP2Q9BSJ2 902 aa8.82□□□□□ -1
GGA3-218ENST00000584243 SH2D4AQ9H788 454 aa8.82□□□□□ -1
GGA3-218ENST00000584243 AAASQ9NRG9 546 aa8.82□□□□□ -1
GGA3-218ENST00000584243 MRPL42Q9Y6G3 142 aaKnown RBP8.82□□□□□ -1
GGA3-218ENST00000584243 EPN1Q9Y6I3 576 aaPredicted RBP8.82□□□□□ -1
GGA3-218ENST00000584243 FOCADQ5VW36 1801 aa8.82□□□□□ -1
GGA3-218ENST00000584243 RALGAPA1Q6GYQ0 2036 aa8.81□□□□□ -1
GGA3-218ENST00000584243 UTP20O75691 2785 aaKnown RBP8.81□□□□□ -1
GGA3-218ENST00000584243 ATMQ13315 3056 aa8.81□□□□□ -1
GGA3-218ENST00000584243 ITPR2Q14571 2701 aa8.81□□□□□ -1
GGA3-218ENST00000584243 A0A087WWV3 80 aa8.81□□□□□ -1
GGA3-218ENST00000584243 FAM205CA6NFA0 338 aa8.81□□□□□ -1
GGA3-218ENST00000584243 CD44P16070 742 aaKnown RBP8.81□□□□□ -1
GGA3-218ENST00000584243 PRLRP16471 622 aa8.81□□□□□ -1
GGA3-218ENST00000584243 HOXB8P17481 243 aaPredicted RBP8.81□□□□□ -1
GGA3-218ENST00000584243 RFX1P22670 979 aa8.81□□□□□ -1
GGA3-218ENST00000584243 MTIF2P46199 727 aaKnown RBP8.81□□□□□ -1
GGA3-218ENST00000584243 MARSP56192 900 aaKnown RBP8.81□□□□□ -1
GGA3-218ENST00000584243 ERVFC1P60507 584 aa8.81□□□□□ -1
GGA3-218ENST00000584243 FKBP3Q00688 224 aaKnown RBP8.81□□□□□ -1
GGA3-218ENST00000584243 KIF5AQ12840 1032 aa8.81□□□□□ -1
GGA3-218ENST00000584243 ABCB5Q2M3G0 1257 aa8.81□□□□□ -1
GGA3-218ENST00000584243 EDRF1Q3B7T1 1238 aa8.81□□□□□ -1
GGA3-218ENST00000584243 C10orf76Q5T2E6 689 aa8.81□□□□□ -1
GGA3-218ENST00000584243 IQSEC1Q6DN90 963 aa8.81□□□□□ -1
GGA3-218ENST00000584243 FBXO38Q6PIJ6 1188 aa8.81□□□□□ -1
GGA3-218ENST00000584243 STXBP4Q6ZWJ1 553 aa8.81□□□□□ -1
GGA3-218ENST00000584243 RSRC2Q7L4I2 434 aaKnown RBP8.81□□□□□ -1
GGA3-218ENST00000584243 SIAH1Q8IUQ4 282 aa8.81□□□□□ -1
GGA3-218ENST00000584243 STAG2Q8N3U4 1231 aa8.81□□□□□ -1
GGA3-218ENST00000584243 ZNF507Q8TCN5 953 aa8.81□□□□□ -1
GGA3-218ENST00000584243 RASGRP4Q8TDF6 673 aa8.81□□□□□ -1
GGA3-218ENST00000584243 RSAD2Q8WXG1 361 aa8.81□□□□□ -1
GGA3-218ENST00000584243 DYNLL2Q96FJ2 89 aa8.81□□□□□ -1
GGA3-218ENST00000584243 ZFP91Q96JP5 570 aaPredicted RBP8.81□□□□□ -1
GGA3-218ENST00000584243 FAM20AQ96MK3 541 aa8.81□□□□□ -1
GGA3-218ENST00000584243 PSTPIP2Q9H939 334 aa8.81□□□□□ -1
GGA3-218ENST00000584243 FAM53CQ9NYF3 392 aa8.81□□□□□ -1
GGA3-218ENST00000584243 KCND2Q9NZV8 630 aa8.81□□□□□ -1
GGA3-218ENST00000584243 DDX25Q9UHL0 483 aaKnown RBP8.81□□□□□ -1
GGA3-218ENST00000584243 SAP30BPQ9UHR5 308 aaKnown RBP8.81□□□□□ -1
GGA3-218ENST00000584243 MYO6Q9UM54 1294 aa8.81□□□□□ -1
GGA3-218ENST00000584243 MTF2Q9Y483 593 aaPredicted RBP8.81□□□□□ -1
GGA3-218ENST00000584243 BAZ2AQ9UIF9 1905 aaKnown RBP8.8□□□□□ -1
GGA3-218ENST00000584243 SSU72P8A0A1W2PR75 194 aa8.8□□□□□ -1
GGA3-218ENST00000584243 hCG_1642624A0A1W2PR95 340 aa8.8□□□□□ -1
GGA3-218ENST00000584243 A6NNZ2 444 aa8.8□□□□□ -1
GGA3-218ENST00000584243 FSCN2O14926 492 aa8.8□□□□□ -1
GGA3-218ENST00000584243 ATXN7O15265 892 aaPredicted RBP8.8□□□□□ -1
GGA3-218ENST00000584243 KLRC4O43908 158 aa8.8□□□□□ -1
GGA3-218ENST00000584243 COPB2P35606 906 aa8.8□□□□□ -1
GGA3-218ENST00000584243 CCT6AP40227 531 aaKnown RBP8.8□□□□□ -1
GGA3-218ENST00000584243 CLK2P49760 499 aaKnown RBP8.8□□□□□ -1
GGA3-218ENST00000584243 STX17P56962 302 aa8.8□□□□□ -1
GGA3-218ENST00000584243 KCNC4Q03721 635 aa8.8□□□□□ -1
GGA3-218ENST00000584243 CDC37Q16543 378 aaPredicted RBP8.8□□□□□ -1
GGA3-218ENST00000584243 IL17AQ16552 155 aa8.8□□□□□ -1
GGA3-218ENST00000584243 IFI16Q16666 785 aaKnown RBP8.8□□□□□ -1
GGA3-218ENST00000584243 TUBB8Q3ZCM7 444 aa8.8□□□□□ -1
GGA3-218ENST00000584243 DUSP28Q4G0W2 176 aa8.8□□□□□ -1
GGA3-218ENST00000584243 AASDHQ4L235 1098 aaPredicted RBP8.8□□□□□ -1
GGA3-218ENST00000584243 TMEM119Q4V9L6 283 aa8.8□□□□□ -1
GGA3-218ENST00000584243 WDR93Q6P2C0 686 aa8.8□□□□□ -1
GGA3-218ENST00000584243 TOGARAM2Q6ZUX3 1019 aa8.8□□□□□ -1
GGA3-218ENST00000584243 EEPD1Q7L9B9 569 aa8.8□□□□□ -1
GGA3-218ENST00000584243 SESTD1Q86VW0 696 aa8.8□□□□□ -1
GGA3-218ENST00000584243 RNF10Q8N5U6 811 aaKnown RBP8.8□□□□□ -1
GGA3-218ENST00000584243 SAMD3Q8N6K7 520 aa8.8□□□□□ -1
GGA3-218ENST00000584243 MSANTD4Q8NCY6 345 aa8.8□□□□□ -1
GGA3-218ENST00000584243 GPR152Q8TDT2 470 aa8.8□□□□□ -1
GGA3-218ENST00000584243 SPOCK2Q92563 424 aa8.8□□□□□ -1
GGA3-218ENST00000584243 RAD54LQ92698 747 aa8.8□□□□□ -1
GGA3-218ENST00000584243 CNOT6LQ96LI5 555 aaKnown RBP8.8□□□□□ -1
GGA3-218ENST00000584243 CCDC42Q96M95 316 aa8.8□□□□□ -1
GGA3-218ENST00000584243 MED15Q96RN5 788 aa8.8□□□□□ -1
GGA3-218ENST00000584243 MTRQ99707 1265 aa8.8□□□□□ -1
GGA3-218ENST00000584243 AMNQ9BXJ7 453 aa8.8□□□□□ -1
GGA3-218ENST00000584243 BLZF1Q9H2G9 400 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms