RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 KCNB2Q92953 911 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 MCRS1Q96EZ8 462 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 CHAMP1Q96JM3 812 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 FAM126AQ9BYI3 521 aaPredicted RBP13.64□□□□□ -0.23
TOP3A-215ENST00000583328 AGXT2Q9BYV1 514 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 PARD6AQ9NPB6 346 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 HEBP1Q9NRV9 189 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 HCFC1R1Q9NWW0 138 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 DNMT3BQ9UBC3 853 aaKnown RBP13.64□□□□□ -0.23
TOP3A-215ENST00000583328 MRPS23Q9Y3D9 190 aaKnown RBP13.64□□□□□ -0.23
TOP3A-215ENST00000583328 SNX14Q9Y5W7 946 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 FANCMQ8IYD8 2048 aa13.64□□□□□ -0.23
TOP3A-215ENST00000583328 A0A1B0GUA9 196 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 CCDC194A0A1B0GVG4 234 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 CCNT1O60563 726 aaKnown RBP13.63□□□□□ -0.23
TOP3A-215ENST00000583328 ECI2O75521 394 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 KIF4AO95239 1232 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 ADRB1P08588 477 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 POU2F2P09086 479 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 GCFC2P16383 781 aaKnown RBP13.63□□□□□ -0.23
TOP3A-215ENST00000583328 PSMA5P28066 241 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 OR1D2P34982 312 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 NRLP54845 237 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 ELAVL2Q12926 359 aaKnown RBP13.63□□□□□ -0.23
TOP3A-215ENST00000583328 MTAPQ13126 283 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 RAB33AQ14088 237 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 NPY5RQ15761 445 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 LPAL2Q16609 132 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 PPP4R3AQ6IN85 833 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 NEK8Q86SG6 692 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 HAS1Q92839 578 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 PLA2G2FQ9BZM2 168 aa13.63□□□□□ -0.23
TOP3A-215ENST00000583328 PRMT8Q9NR22 394 aaPredicted RBP13.63□□□□□ -0.23
TOP3A-215ENST00000583328 ZMYM2Q9UBW7 1377 aa13.62□□□□□ -0.23
TOP3A-215ENST00000583328 TBX3O15119 743 aa13.62□□□□□ -0.23
TOP3A-215ENST00000583328 DGAT1O75907 488 aa13.62□□□□□ -0.23
TOP3A-215ENST00000583328 BAG4O95429 457 aaKnown RBP13.62□□□□□ -0.23
TOP3A-215ENST00000583328 THP07101 528 aa13.62□□□□□ -0.23
TOP3A-215ENST00000583328 GLRA2P23416 452 aa13.62□□□□□ -0.23
TOP3A-215ENST00000583328 ARL2P36404 184 aa13.62□□□□□ -0.23
TOP3A-215ENST00000583328 SPEM2Q0P670 501 aa13.62□□□□□ -0.23
TOP3A-215ENST00000583328 FZD5Q13467 585 aa13.62□□□□□ -0.23
TOP3A-215ENST00000583328 PPP2R5DQ14738 602 aa13.62□□□□□ -0.23
TOP3A-215ENST00000583328 CCDC43Q96MW1 224 aaKnown RBP13.62□□□□□ -0.23
TOP3A-215ENST00000583328 AIFM3Q96NN9 605 aa13.62□□□□□ -0.23
TOP3A-215ENST00000583328 NFKBIZQ9BYH8 718 aa13.62□□□□□ -0.23
TOP3A-215ENST00000583328 GDE1Q9NZC3 331 aa13.62□□□□□ -0.23
TOP3A-215ENST00000583328 NDRG2Q9UN36 371 aaKnown RBP13.62□□□□□ -0.23
TOP3A-215ENST00000583328 KCNJ14Q9UNX9 436 aa13.62□□□□□ -0.23
TOP3A-215ENST00000583328 MAN2B1O00754 1011 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 SLITRK3O94933 977 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 REC8O95072 547 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 RHOP08100 348 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 HSPA4P34932 840 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 EVCP57679 992 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 PPM1JQ5JR12 505 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 LAIR1Q6GTX8 287 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 TANGO2Q6ICL3 276 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 CPLX2Q6PUV4 134 aaKnown RBP13.61□□□□□ -0.23
TOP3A-215ENST00000583328 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.61□□□□□ -0.23
TOP3A-215ENST00000583328 PRR23BQ6ZRT6 265 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 RTL10Q7L3V2 364 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 SLFN12Q8IYM2 578 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 FAM177A1Q8N128 213 aaPredicted RBP13.61□□□□□ -0.23
TOP3A-215ENST00000583328 CELF5Q8N6W0 485 aaKnown RBP13.61□□□□□ -0.23
TOP3A-215ENST00000583328 NETO1Q8TDF5 533 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 NAP1L4Q99733 375 aaKnown RBP13.61□□□□□ -0.23
TOP3A-215ENST00000583328 EIF2AK1Q9BQI3 630 aaKnown RBP13.61□□□□□ -0.23
TOP3A-215ENST00000583328 POLR3FQ9H1D9 316 aaPredicted RBP13.61□□□□□ -0.23
TOP3A-215ENST00000583328 ANKEF1Q9NU02 776 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 SNTG2Q9NY99 539 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.61□□□□□ -0.23
TOP3A-215ENST00000583328 DOCK6Q96HP0 2047 aa13.61□□□□□ -0.23
TOP3A-215ENST00000583328 MTCL1Q9Y4B5 1905 aaKnown RBP13.6□□□□□ -0.23
TOP3A-215ENST00000583328 COL4A3Q01955 1670 aa13.6□□□□□ -0.23
TOP3A-215ENST00000583328 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.6□□□□□ -0.23
TOP3A-215ENST00000583328 LRRIQ4A6NIV6 560 aa13.6□□□□□ -0.23
TOP3A-215ENST00000583328 RETP07949 1114 aa13.6□□□□□ -0.23
TOP3A-215ENST00000583328 TMEM132AQ24JP5 1023 aa13.6□□□□□ -0.23
TOP3A-215ENST00000583328 PIK3AP1Q6ZUJ8 805 aa13.6□□□□□ -0.23
TOP3A-215ENST00000583328 POTEDQ86YR6 584 aa13.6□□□□□ -0.23
TOP3A-215ENST00000583328 DNASE1L2Q92874 299 aa13.6□□□□□ -0.23
TOP3A-215ENST00000583328 ELSPBP1Q96BH3 223 aa13.6□□□□□ -0.23
TOP3A-215ENST00000583328 CHRDQ9H2X0 955 aa13.6□□□□□ -0.23
TOP3A-215ENST00000583328 BRD9Q9H8M2 597 aa13.6□□□□□ -0.23
TOP3A-215ENST00000583328 PRMT7Q9NVM4 692 aaPredicted RBP13.6□□□□□ -0.23
TOP3A-215ENST00000583328 MTRRQ9UBK8 725 aa13.6□□□□□ -0.23
TOP3A-215ENST00000583328 CACNA1GO43497 2377 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 SHISA7A6NL88 538 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 PTGESO14684 152 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 SLC30A4O14863 429 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 N4BP3O15049 544 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 EIF5BO60841 1220 aaKnown RBP13.59□□□□□ -0.23
TOP3A-215ENST00000583328 RECQL4O94761 1208 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 B3GAT3O94766 335 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 LYPLA2O95372 231 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 CEBPBP17676 345 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 PTPN2P17706 415 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 KCNA4P22459 653 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 ELF1P32519 619 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms