RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 FAM171A1Q5VUB5 890 aa15□□□□□ -0.01
SS18-222ENST00000582792 CDCA2Q69YH5 1023 aaPredicted RBP15□□□□□ -0.01
SS18-222ENST00000582792 PDXDC1Q6P996 788 aa15□□□□□ -0.01
SS18-222ENST00000582792 DGLUCYQ7Z3D6 616 aa15□□□□□ -0.01
SS18-222ENST00000582792 CEP57Q86XR8 500 aa15□□□□□ -0.01
SS18-222ENST00000582792 WASF1Q92558 559 aa15□□□□□ -0.01
SS18-222ENST00000582792 FGF13Q92913 245 aa15□□□□□ -0.01
SS18-222ENST00000582792 TBC1D32Q96NH3 1257 aa15□□□□□ -0.01
SS18-222ENST00000582792 FZD8Q9H461 694 aa15□□□□□ -0.01
SS18-222ENST00000582792 GPRC5CQ9NQ84 441 aa15□□□□□ -0.01
SS18-222ENST00000582792 ORC3Q9UBD5 711 aaPredicted RBP15□□□□□ -0.01
SS18-222ENST00000582792 MED19A0JLT2 244 aaPredicted RBP14.99□□□□□ -0.01
SS18-222ENST00000582792 N4BP3O15049 544 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 CCL16O15467 120 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 ADAM12O43184 909 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 KINO60870 393 aaKnown RBP14.99□□□□□ -0.01
SS18-222ENST00000582792 XYLBO75191 536 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 THP07101 528 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 POU2F2P09086 479 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 XRCC6P12956 609 aaKnown RBP eCLIP14.99□□□□□ -0.01
SS18-222ENST00000582792 ELAVL2Q12926 359 aaKnown RBP14.99□□□□□ -0.01
SS18-222ENST00000582792 PUM1Q14671 1186 aaKnown RBP eCLIP14.99□□□□□ -0.01
SS18-222ENST00000582792 NAB2Q15742 525 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 MLF2Q15773 248 aaPredicted RBP14.99□□□□□ -0.01
SS18-222ENST00000582792 ZNF528Q3MIS6 628 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 ZBTB8OSQ8IWT0 167 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 BORCS6Q96GS4 357 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 KIF2CQ99661 725 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 BCO2Q9BYV7 579 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 PDZD7Q9H5P4 517 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 BRMS1Q9HCU9 246 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 TPCN1Q9ULQ1 816 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 POLIQ9UNA4 740 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 COL4A3Q01955 1670 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 PATJQ8NI35 1801 aa14.99□□□□□ -0.01
SS18-222ENST00000582792 VWA8A3KMH1 1905 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 NCOR2Q9Y618 2525 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 A0A087WWV3 80 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 TTLL13PA6NNM8 815 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 NEMFO60524 1076 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 RECQL4O94761 1208 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 TXKP42681 527 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 PFKPQ01813 784 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 RAB33AQ14088 237 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 UVSSAQ2YD98 709 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 SLC44A4Q53GD3 710 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 AXDND1Q5T1B0 1012 aaPredicted RBP14.98□□□□□ -0.01
SS18-222ENST00000582792 RSPO2Q6UXX9 243 aaPredicted RBP14.98□□□□□ -0.01
SS18-222ENST00000582792 MAEAQ7L5Y9 396 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 DCLK2Q8N568 766 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 SUMF1Q8NBK3 374 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 MCPH1Q8NEM0 835 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 ITFG1Q8TB96 612 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 SLC7A14Q8TBB6 771 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 MTMR9Q96QG7 549 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 OSBPL6Q9BZF3 934 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 CXCL16Q9H2A7 254 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 SPATA6Q9NWH7 488 aaPredicted RBP14.98□□□□□ -0.01
SS18-222ENST00000582792 SNTG2Q9NY99 539 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 DLL3Q9NYJ7 618 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 FBXO4Q9UKT5 387 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 KCNH3Q9ULD8 1083 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 GPR179Q6PRD1 2367 aa14.98□□□□□ -0.01
SS18-222ENST00000582792 WNT7AO00755 349 aa14.97□□□□□ -0.01
SS18-222ENST00000582792 LAMTOR5O43504 91 aa14.97□□□□□ -0.01
SS18-222ENST00000582792 FDPSP14324 419 aaKnown RBP14.97□□□□□ -0.01
SS18-222ENST00000582792 PRPF4BQ13523 1007 aaKnown RBP14.97□□□□□ -0.01
SS18-222ENST00000582792 UBXN2BQ14CS0 331 aa14.97□□□□□ -0.01
SS18-222ENST00000582792 RABEP1Q15276 862 aa14.97□□□□□ -0.01
SS18-222ENST00000582792 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.97□□□□□ -0.01
SS18-222ENST00000582792 RTL10Q7L3V2 364 aa14.97□□□□□ -0.01
SS18-222ENST00000582792 NPAS3Q8IXF0 933 aa14.97□□□□□ -0.01
SS18-222ENST00000582792 C2orf40Q9H1Z8 148 aa14.97□□□□□ -0.01
SS18-222ENST00000582792 LTB4R2Q9NPC1 389 aa14.97□□□□□ -0.01
SS18-222ENST00000582792 MTRRQ9UBK8 725 aa14.97□□□□□ -0.01
SS18-222ENST00000582792 MTF2Q9Y483 593 aaPredicted RBP14.97□□□□□ -0.01
SS18-222ENST00000582792 NOTCH4Q99466 2003 aa14.97□□□□□ -0.01
SS18-222ENST00000582792 FAM170BA6NMN3 283 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 TMEM189-UBE2V1I3L0A0 370 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 SPTLC1O15269 473 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 SPATA31C1P0DKV0 1188 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 ATP2B1P20020 1258 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 FGFR3P22607 806 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 OR1D2P34982 312 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 MAGEA9P43362 315 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 NEK4P51957 841 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 MAPK6Q16659 721 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 TMEM132AQ24JP5 1023 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 PABPC1LQ4VXU2 614 aaKnown RBP14.96□□□□□ -0.01
SS18-222ENST00000582792 NOSTRINQ8IVI9 506 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 KXD1Q9BQD3 176 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 ADPGKQ9BRR6 497 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 TUFT1Q9NNX1 390 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 HCFC1R1Q9NWW0 138 aa14.96□□□□□ -0.01
SS18-222ENST00000582792 DNMT3BQ9UBC3 853 aaKnown RBP14.96□□□□□ -0.01
SS18-222ENST00000582792 BTBD18B2RXH4 712 aa14.95□□□□□ -0.02
SS18-222ENST00000582792 ACKR2O00590 384 aa14.95□□□□□ -0.02
SS18-222ENST00000582792 PRKCBP05771 671 aa14.95□□□□□ -0.02
SS18-222ENST00000582792 CATSPER3Q86XQ3 398 aa14.95□□□□□ -0.02
SS18-222ENST00000582792 BSNDQ8WZ55 320 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms