RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 MRPS17Q9Y2R5 130 aaKnown RBP11.01□□□□□ -0.65
RFFL-208ENST00000581039 FRYLO94915 3013 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 ZMYM2Q9UBW7 1377 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 MTCL1Q9Y4B5 1905 aaKnown RBP11□□□□□ -0.65
RFFL-208ENST00000581039 TBC1D4O60343 1298 aa11□□□□□ -0.65
RFFL-208ENST00000581039 KRT37O76014 449 aa11□□□□□ -0.65
RFFL-208ENST00000581039 KIF4AO95239 1232 aa11□□□□□ -0.65
RFFL-208ENST00000581039 THP07101 528 aa11□□□□□ -0.65
RFFL-208ENST00000581039 XBP1P17861 261 aa11□□□□□ -0.65
RFFL-208ENST00000581039 RPS9P46781 194 aaKnown RBP11□□□□□ -0.65
RFFL-208ENST00000581039 STK3Q13188 491 aa11□□□□□ -0.65
RFFL-208ENST00000581039 RAB33AQ14088 237 aa11□□□□□ -0.65
RFFL-208ENST00000581039 TOB2Q14106 344 aaPredicted RBP11□□□□□ -0.65
RFFL-208ENST00000581039 PABPC1LQ4VXU2 614 aaKnown RBP11□□□□□ -0.65
RFFL-208ENST00000581039 TPRG1Q6ZUI0 275 aa11□□□□□ -0.65
RFFL-208ENST00000581039 CLDN23Q96B33 292 aa11□□□□□ -0.65
RFFL-208ENST00000581039 FAM126AQ9BYI3 521 aaPredicted RBP11□□□□□ -0.65
RFFL-208ENST00000581039 EPC1Q9H2F5 836 aa11□□□□□ -0.65
RFFL-208ENST00000581039 ANKEF1Q9NU02 776 aa11□□□□□ -0.65
RFFL-208ENST00000581039 DNMT3BQ9UBC3 853 aaKnown RBP11□□□□□ -0.65
RFFL-208ENST00000581039 USP18Q9UMW8 372 aa11□□□□□ -0.65
RFFL-208ENST00000581039 SMG5Q9UPR3 1016 aaKnown RBP11□□□□□ -0.65
RFFL-208ENST00000581039 MRPS23Q9Y3D9 190 aaKnown RBP11□□□□□ -0.65
RFFL-208ENST00000581039 CYP46A1Q9Y6A2 500 aa11□□□□□ -0.65
RFFL-208ENST00000581039 ADAM12O43184 909 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 LILRB5O75023 590 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 ECI2O75521 394 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 LYPLA2O95372 231 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 POU2F2P09086 479 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 OR1D2P34982 312 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 ADCY1Q08828 1119 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 SPIRE1Q08AE8 756 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 TMEM132AQ24JP5 1023 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 TSSK4Q6SA08 328 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 RTL10Q7L3V2 364 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 POTEDQ86YR6 584 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 NPAS3Q8IXF0 933 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 ING5Q8WYH8 240 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 NELL1Q92832 810 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 MCRS1Q96EZ8 462 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 PRIMPOLQ96LW4 560 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 HSD17B14Q9BPX1 270 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 EIF2AK1Q9BQI3 630 aaKnown RBP10.99□□□□□ -0.65
RFFL-208ENST00000581039 LARP6Q9BRS8 491 aaKnown RBP10.99□□□□□ -0.65
RFFL-208ENST00000581039 RTKNQ9BST9 563 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 POLR3FQ9H1D9 316 aaPredicted RBP10.99□□□□□ -0.65
RFFL-208ENST00000581039 ZSWIM6Q9HCJ5 1215 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 PRMT7Q9NVM4 692 aaPredicted RBP10.99□□□□□ -0.65
RFFL-208ENST00000581039 HCFC1R1Q9NWW0 138 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 GDE1Q9NZC3 331 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 GMEB2Q9UKD1 530 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 PCDHA12Q9UN75 941 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 SPTBN2O15020 2390 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 FANCMQ8IYD8 2048 aa10.99□□□□□ -0.65
RFFL-208ENST00000581039 ACACBO00763 2458 aa10.98□□□□□ -0.65
RFFL-208ENST00000581039 DCDC2BA2VCK2 349 aa10.98□□□□□ -0.65
RFFL-208ENST00000581039 LRRIQ4A6NIV6 560 aa10.98□□□□□ -0.65
RFFL-208ENST00000581039 CDKL5O76039 1030 aa10.98□□□□□ -0.65
RFFL-208ENST00000581039 REC8O95072 547 aa10.98□□□□□ -0.65
RFFL-208ENST00000581039 XRCC6P12956 609 aaKnown RBP eCLIP10.98□□□□□ -0.65
RFFL-208ENST00000581039 TARSP26639 723 aaKnown RBP10.98□□□□□ -0.65
RFFL-208ENST00000581039 RARRES1P49788 294 aa10.98□□□□□ -0.65
RFFL-208ENST00000581039 NRLP54845 237 aa10.98□□□□□ -0.65
RFFL-208ENST00000581039 MTAPQ13126 283 aa10.98□□□□□ -0.65
RFFL-208ENST00000581039 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.98□□□□□ -0.65
RFFL-208ENST00000581039 PPP4R3CPQ6ZMV5 832 aa10.98□□□□□ -0.65
RFFL-208ENST00000581039 MAEAQ7L5Y9 396 aa10.98□□□□□ -0.65
RFFL-208ENST00000581039 ZBTB8OSQ8IWT0 167 aa10.98□□□□□ -0.65
RFFL-208ENST00000581039 HEBP1Q9NRV9 189 aa10.98□□□□□ -0.65
RFFL-208ENST00000581039 SNTG2Q9NY99 539 aa10.98□□□□□ -0.65
RFFL-208ENST00000581039 RAB23Q9ULC3 237 aa10.98□□□□□ -0.65
RFFL-208ENST00000581039 TDRD15B5MCY1 1934 aaKnown RBP10.97□□□□□ -0.65
RFFL-208ENST00000581039 A0A087WWV3 80 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 MAN2B1O00754 1011 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 PTGESO14684 152 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 N4BP3O15049 544 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 TRAPPC3O43617 180 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 USO1O60763 962 aaKnown RBP10.97□□□□□ -0.65
RFFL-208ENST00000581039 B3GAT3O94766 335 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 RHOP08100 348 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 PTPN2P17706 415 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 FGFR3P22607 806 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 PRPF4BQ13523 1007 aaKnown RBP10.97□□□□□ -0.65
RFFL-208ENST00000581039 PPP2R5DQ14738 602 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 TANGO2Q6ICL3 276 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 CENPQQ7L2Z9 268 aaPredicted RBP10.97□□□□□ -0.65
RFFL-208ENST00000581039 OXER1Q8TDS5 423 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 PIGOQ8TEQ8 1089 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 ELSPBP1Q96BH3 223 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 ADPGKQ9BRR6 497 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 PLA2G2FQ9BZM2 168 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 FZD8Q9H461 694 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 PRMT8Q9NR22 394 aaPredicted RBP10.97□□□□□ -0.65
RFFL-208ENST00000581039 MTRRQ9UBK8 725 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 CDY1Q9Y6F8 540 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 DOCK6Q96HP0 2047 aa10.97□□□□□ -0.65
RFFL-208ENST00000581039 RECQL4O94761 1208 aa10.96□□□□□ -0.65
RFFL-208ENST00000581039 LRG1P02750 347 aa10.96□□□□□ -0.65
RFFL-208ENST00000581039 LIG1P18858 919 aa10.96□□□□□ -0.65
RFFL-208ENST00000581039 ATP2B1P20020 1258 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms