RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ENO2P09104 434 aaPredicted RBP3.72□□□□□ -1.81
KPNB1-208ENST00000580019 CBSLP0DN79 551 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 VDRP11473 427 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 CBSP35520 551 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 ETV4P43268 484 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 GUCY1A3Q02108 690 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 DSG1Q02413 1049 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 ODF1Q14990 250 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 CCDC96Q2M329 555 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 B3GNT9Q6UX72 402 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 MAATS1Q7Z4T9 603 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 SKAP1Q86WV1 359 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 ZNF513Q8N8E2 541 aaPredicted RBP3.72□□□□□ -1.81
KPNB1-208ENST00000580019 DCAF4Q8WV16 495 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 ERP27Q96DN0 273 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 TMEM176AQ96HP8 235 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 FAM193BQ96PV7 902 aaPredicted RBP3.72□□□□□ -1.81
KPNB1-208ENST00000580019 SLC29A3Q9BZD2 475 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 SPTLC3Q9NUV7 552 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 THG1LQ9NWX6 298 aaKnown RBP3.72□□□□□ -1.81
KPNB1-208ENST00000580019 CLIC5Q9NZA1 410 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 DNM3Q9UQ16 869 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 PCDHA9Q9Y5H5 950 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 COL4A3Q01955 1670 aa3.71□□□□□ -1.81
KPNB1-208ENST00000580019 CNTNAP2Q9UHC6 1331 aa3.71□□□□□ -1.81
KPNB1-208ENST00000580019 CYSRT1A8MQ03 144 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 H7BY64 318 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 TPP1O14773 563 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 FIBPO43427 364 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 TBX1O43435 398 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 TLR5O60602 858 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 PQBP1O60828 265 aaKnown RBP3.71□□□□□ -1.82
KPNB1-208ENST00000580019 DGKIO75912 1065 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 GLRX3O76003 335 aaKnown RBP3.71□□□□□ -1.82
KPNB1-208ENST00000580019 ZRANB2O95218 330 aaKnown RBP eCLIP3.71□□□□□ -1.82
KPNB1-208ENST00000580019 KCNH1O95259 989 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 IL18BPO95998 194 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 SNRPB2P08579 225 aaKnown RBP3.71□□□□□ -1.82
KPNB1-208ENST00000580019 KCNA6P17658 529 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 TNFAIP3P21580 790 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 ECE1P42892 770 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 GRK6P43250 576 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 MAPK9P45984 424 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 MAN2A2P49641 1150 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 GFRA1P56159 465 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 IFIT5Q13325 482 aaKnown RBP3.71□□□□□ -1.82
KPNB1-208ENST00000580019 TRIM14Q14142 442 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 CLUL1Q15846 466 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 NTRK3Q16288 839 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 STYK1Q6J9G0 422 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 MZT2BQ6NZ67 158 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 CFAP161Q6P656 301 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 KCNV1Q6PIU1 500 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 LDHAL6AQ6ZMR3 332 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 Q6ZRM9 215 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 USP30Q70CQ3 517 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 USP53Q70EK8 1073 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 RSRC2Q7L4I2 434 aaKnown RBP3.71□□□□□ -1.82
KPNB1-208ENST00000580019 MTDHQ86UE4 582 aaKnown RBP3.71□□□□□ -1.82
KPNB1-208ENST00000580019 IGSF22Q8N9C0 903 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 CLRN3Q8NCR9 226 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 NAXEQ8NCW5 288 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 NGDNQ8NEJ9 315 aaKnown RBP3.71□□□□□ -1.82
KPNB1-208ENST00000580019 IL17REQ8NFR9 667 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 DEPTORQ8TB45 409 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.71□□□□□ -1.82
KPNB1-208ENST00000580019 CHTF18Q8WVB6 975 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 ANKS1AQ92625 1134 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 SLC5A5Q92911 643 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 SGCZQ96LD1 299 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 TAAR9Q96RI9 348 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 TACO1Q9BSH4 297 aaKnown RBP3.71□□□□□ -1.82
KPNB1-208ENST00000580019 ISCA1Q9BUE6 129 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 LGR4Q9BXB1 951 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 VTA1Q9NP79 307 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 CYP26B1Q9NR63 512 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 C14orf119Q9NWQ9 140 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 B4GALT6Q9UBX8 382 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.71□□□□□ -1.82
KPNB1-208ENST00000580019 HDAC9Q9UKV0 1011 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 FZD1Q9UP38 647 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 TRAF6Q9Y4K3 522 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 INSL6Q9Y581 213 aa3.71□□□□□ -1.82
KPNB1-208ENST00000580019 AQRO60306 1485 aaKnown RBP eCLIP3.71□□□□□ -1.822e-11■■■□□ 17.1
KPNB1-208ENST00000580019 COL3A1P02461 1466 aaPredicted RBP3.71□□□□□ -1.82
KPNB1-208ENST00000580019 ITIH6Q6UXX5 1313 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 DNAJC9-AS1A6NH13 148 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 GSTA4O15217 222 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 ORC4O43929 436 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 PCDHGA12O60330 932 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 SNX2O60749 519 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 FAM20BO75063 409 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 AGR2O95994 175 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 ITGB1P05556 798 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 SLC5A1P13866 664 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 ATP2A2P16615 1042 aaKnown RBP3.7□□□□□ -1.82
KPNB1-208ENST00000580019 CHKAP35790 457 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 ZEB1P37275 1124 aaPredicted RBP3.7□□□□□ -1.82
KPNB1-208ENST00000580019 TM4SF4P48230 202 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 FAM193AP78312 1265 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms