RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 MRPL43Q8N983 215 aaKnown RBP26.16■■□□□ 1.78
LIMD2-207ENST00000579329 LRFN3Q9BTN0 628 aa26.16■■□□□ 1.78
LIMD2-207ENST00000579329 VN1R3Q9BXE9 311 aa26.16■■□□□ 1.78
LIMD2-207ENST00000579329 OLFML3Q9NRN5 406 aa26.16■■□□□ 1.78
LIMD2-207ENST00000579329 C2orf71A6NGG8 1288 aa26.15■■□□□ 1.78
LIMD2-207ENST00000579329 PER2O15055 1255 aa26.15■■□□□ 1.78
LIMD2-207ENST00000579329 LINC01565O15544 149 aa26.15■■□□□ 1.78
LIMD2-207ENST00000579329 CXCL14O95715 111 aa26.15■■□□□ 1.78
LIMD2-207ENST00000579329 NAB2Q15742 525 aa26.15■■□□□ 1.78
LIMD2-207ENST00000579329 GLRA4Q5JXX5 417 aa26.15■■□□□ 1.78
LIMD2-207ENST00000579329 ADALQ6DHV7 355 aa26.15■■□□□ 1.78
LIMD2-207ENST00000579329 SNX27Q96L92 541 aa26.15■■□□□ 1.78
LIMD2-207ENST00000579329 HERC2P3Q9BVR0 1158 aa26.15■■□□□ 1.78
LIMD2-207ENST00000579329 TRIM9Q9C026 710 aa26.15■■□□□ 1.78
LIMD2-207ENST00000579329 KCNH3Q9ULD8 1083 aa26.15■■□□□ 1.78
LIMD2-207ENST00000579329 CASTOR2A6NHX0 329 aa26.14■■□□□ 1.78
LIMD2-207ENST00000579329 H3BQ06 376 aaPredicted RBP26.14■■□□□ 1.78
LIMD2-207ENST00000579329 PPP1R37O75864 691 aa26.14■■□□□ 1.78
LIMD2-207ENST00000579329 SOD2P04179 222 aa26.14■■□□□ 1.78
LIMD2-207ENST00000579329 LTBRP36941 435 aa26.14■■□□□ 1.78
LIMD2-207ENST00000579329 NDUFV1P49821 464 aa26.14■■□□□ 1.78
LIMD2-207ENST00000579329 ALCAMQ13740 583 aa26.14■■□□□ 1.78
LIMD2-207ENST00000579329 HSP90AA2PQ14568 343 aaPredicted RBP26.14■■□□□ 1.78
LIMD2-207ENST00000579329 KYAT1Q16773 422 aa26.14■■□□□ 1.78
LIMD2-207ENST00000579329 XKR4Q5GH76 650 aa26.14■■□□□ 1.78
LIMD2-207ENST00000579329 PPP1R10Q96QC0 940 aaKnown RBP26.14■■□□□ 1.78
LIMD2-207ENST00000579329 HAPLN2Q9GZV7 340 aa26.14■■□□□ 1.78
LIMD2-207ENST00000579329 TBC1D7Q9P0N9 293 aa26.14■■□□□ 1.78
LIMD2-207ENST00000579329 IRAK3Q9Y616 596 aa26.14■■□□□ 1.78
LIMD2-207ENST00000579329 SMIM28A0A1B0GU29 152 aa26.13■■□□□ 1.77
LIMD2-207ENST00000579329 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.13■■□□□ 1.77
LIMD2-207ENST00000579329 TBX10O75333 385 aa26.13■■□□□ 1.77
LIMD2-207ENST00000579329 CMA1P23946 247 aa26.13■■□□□ 1.77
LIMD2-207ENST00000579329 ASIC1P78348 528 aa26.13■■□□□ 1.77
LIMD2-207ENST00000579329 CNNM4Q6P4Q7 775 aa26.13■■□□□ 1.77
LIMD2-207ENST00000579329 ALKAL1Q6UXT8 129 aa26.13■■□□□ 1.77
LIMD2-207ENST00000579329 AUTS2Q8WXX7 1259 aa26.13■■□□□ 1.77
LIMD2-207ENST00000579329 STRA6Q9BX79 667 aa26.13■■□□□ 1.77
LIMD2-207ENST00000579329 CNTN3Q9P232 1028 aa26.13■■□□□ 1.77
LIMD2-207ENST00000579329 ADAM28Q9UKQ2 775 aa26.13■■□□□ 1.77
LIMD2-207ENST00000579329 EXOC7Q9UPT5 735 aa26.13■■□□□ 1.77
LIMD2-207ENST00000579329 F8W810 466 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 GCNT3O95395 438 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 URODP06132 367 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 CLTAP09496 248 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 SRGAP2BP0DMP2 458 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 COASYQ13057 564 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 PTPN14Q15678 1187 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 PUS10Q3MIT2 529 aaKnown RBP26.12■■□□□ 1.77
LIMD2-207ENST00000579329 SEZ6Q53EL9 994 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 FUT10Q6P4F1 479 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 SLC39A4Q6P5W5 647 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 RNF168Q8IYW5 571 aaPredicted RBP26.12■■□□□ 1.77
LIMD2-207ENST00000579329 CEP57L1Q8IYX8 460 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 TMEM87AQ8NBN3 555 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 RABGGTAQ92696 567 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 C7orf25Q9BPX7 421 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 PAAF1Q9BRP4 392 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 SLC38A7Q9NVC3 462 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 CACNG4Q9UBN1 327 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 PCDHB13Q9Y5F0 798 aa26.12■■□□□ 1.77
LIMD2-207ENST00000579329 OGTO15294 1046 aa26.11■■□□□ 1.77
LIMD2-207ENST00000579329 TADA2AO75478 443 aa26.11■■□□□ 1.77
LIMD2-207ENST00000579329 GLP2RO95838 553 aa26.11■■□□□ 1.77
LIMD2-207ENST00000579329 EFEMP2O95967 443 aa26.11■■□□□ 1.77
LIMD2-207ENST00000579329 KCNE1P15382 129 aa26.11■■□□□ 1.77
LIMD2-207ENST00000579329 PFKFB1P16118 471 aa26.11■■□□□ 1.77
LIMD2-207ENST00000579329 HOXD11P31277 338 aaPredicted RBP26.11■■□□□ 1.77
LIMD2-207ENST00000579329 DLX2Q07687 328 aaPredicted RBP26.11■■□□□ 1.77
LIMD2-207ENST00000579329 L1TD1Q5T7N2 865 aaKnown RBP26.11■■□□□ 1.77
LIMD2-207ENST00000579329 SLFN12LQ6IEE8 588 aa26.11■■□□□ 1.77
LIMD2-207ENST00000579329 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.11■■□□□ 1.77
LIMD2-207ENST00000579329 KHSRPQ92945 711 aaKnown RBP eCLIP26.11■■□□□ 1.77
LIMD2-207ENST00000579329 UROC1Q96N76 676 aa26.11■■□□□ 1.77
LIMD2-207ENST00000579329 ACCSQ96QU6 501 aa26.11■■□□□ 1.77
LIMD2-207ENST00000579329 MSTO1Q9BUK6 570 aa26.11■■□□□ 1.77
LIMD2-207ENST00000579329 MRPL17Q9NRX2 175 aaKnown RBP26.11■■□□□ 1.77
LIMD2-207ENST00000579329 SSX2IPQ9Y2D8 614 aa26.11■■□□□ 1.77
LIMD2-207ENST00000579329 HCN4Q9Y3Q4 1203 aa26.11■■□□□ 1.77
LIMD2-207ENST00000579329 A0A0B4J269 797 aa26.1■■□□□ 1.77
LIMD2-207ENST00000579329 GLUD2P49448 558 aa26.1■■□□□ 1.77
LIMD2-207ENST00000579329 SLC10A6Q3KNW5 377 aa26.1■■□□□ 1.77
LIMD2-207ENST00000579329 PLEKHA5Q9HAU0 1116 aa26.1■■□□□ 1.77
LIMD2-207ENST00000579329 USP25Q9UHP3 1055 aa26.1■■□□□ 1.77
LIMD2-207ENST00000579329 SERTAD1Q9UHV2 236 aa26.1■■□□□ 1.77
LIMD2-207ENST00000579329 CITO14578 2027 aa26.1■■□□□ 1.77
LIMD2-207ENST00000579329 SF3B1O75533 1304 aaKnown RBP eCLIP26.1■■□□□ 1.77
LIMD2-207ENST00000579329 A0A1B0GVL5 298 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 ANKRD63C9JTQ0 380 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 CLASP2O75122 1294 aaKnown RBP26.09■■□□□ 1.77
LIMD2-207ENST00000579329 KIF4AO95239 1232 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 SLFN14P0C7P3 912 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 CXCL8P10145 99 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 MYBP10242 640 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 CASP5P51878 434 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 TMEM31Q5JXX7 168 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 PTCRAQ6ISU1 281 aaPredicted RBP26.09■■□□□ 1.77
LIMD2-207ENST00000579329 STXBP4Q6ZWJ1 553 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 VN1R2Q8NFZ6 395 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 ZMAT2Q96NC0 199 aaKnown RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms