RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 PROZP22891 400 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 AP3M2P53677 418 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 DSC3Q14574 896 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 TMEM240Q5SV17 173 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 C16orf59Q7L2K0 433 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 ZBTB33Q86T24 672 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 HACE1Q8IYU2 909 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 SPC24Q8NBT2 197 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 LINC01599Q8WXQ3 324 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 SAAL1Q96ER3 474 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 BORCS6Q96GS4 357 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 MFSD14AQ96MC6 490 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 ERGIC2Q96RQ1 377 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 ADAM2Q99965 735 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 TRIM6Q9C030 488 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 MTIF3Q9H2K0 278 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 IKZF4Q9H2S9 585 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 CEP290O15078 2479 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 GOLGA8IPA6NC78 632 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 GOLGA8JA6NMD2 632 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 TISP43B9A030 160 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 IL18RAPO95256 599 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 CLTAP09496 248 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 HARSP12081 509 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 HOXA11P31270 313 aaPredicted RBP15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 KCNJ6P48051 423 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 CYP24A1Q07973 514 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 PSMD6Q15008 389 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 TSR1Q2NL82 804 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 MIIPQ5JXC2 388 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 SLC27A1Q6PCB7 646 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 GBP6Q6ZN66 633 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 CDR2LQ86X02 465 aaPredicted RBP15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 ZNF397Q8NF99 534 aaPredicted RBP15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 ZBTB45Q96K62 511 aaPredicted RBP15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 GDF15Q99988 308 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 CCDC94Q9BW85 323 aaPredicted RBP15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 TSPYL2Q9H2G4 693 aaPredicted RBP15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 PDZD7Q9H5P4 517 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 RPF1Q9H9Y2 349 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 PTPRHQ9HD43 1115 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 C1orf112Q9NSG2 853 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 RBAKQ9NYW8 714 aaPredicted RBP15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 DAAM1Q9Y4D1 1078 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 MICAL3Q7RTP6 2002 aa15.1■□□□□ 0.01
CSNK1D-209ENST00000578904 TULP1O00294 542 aaPredicted RBP15.09■□□□□ 0.01
CSNK1D-209ENST00000578904 TEX33O43247 280 aa15.09■□□□□ 0.01
CSNK1D-209ENST00000578904 NPTXRO95502 500 aa15.09■□□□□ 0.01
CSNK1D-209ENST00000578904 AMHP03971 560 aa15.09■□□□□ 0.01
CSNK1D-209ENST00000578904 TRIM21P19474 475 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-209ENST00000578904 MCCD1P59942 119 aaPredicted RBP15.09■□□□□ 0.01
CSNK1D-209ENST00000578904 EEF1DP3Q658K8 133 aa15.09■□□□□ 0.01
CSNK1D-209ENST00000578904 CBWD2Q8IUF1 395 aa15.09■□□□□ 0.01
CSNK1D-209ENST00000578904 CD302Q8IX05 232 aa15.09■□□□□ 0.01
CSNK1D-209ENST00000578904 CCDC150Q8NCX0 1101 aa15.09■□□□□ 0.01
CSNK1D-209ENST00000578904 NEK11Q8NG66 645 aa15.09■□□□□ 0.01
CSNK1D-209ENST00000578904 HERVK_113Q902F9 699 aa15.09■□□□□ 0.01
CSNK1D-209ENST00000578904 SLC35C1Q96A29 364 aa15.09■□□□□ 0.01
CSNK1D-209ENST00000578904 RGS18Q9NS28 235 aa15.09■□□□□ 0.01
CSNK1D-209ENST00000578904 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.08■□□□□ 0
CSNK1D-209ENST00000578904 ENPP3O14638 875 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 PMM2O15305 246 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 SKIP12755 728 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 TNNI1P19237 187 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 FMO5P49326 533 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 ACOT2P49753 483 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 RAB27AP51159 221 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 YARSP54577 528 aaKnown RBP15.08■□□□□ 0
CSNK1D-209ENST00000578904 WDR5P61964 334 aaKnown RBP15.08■□□□□ 0
CSNK1D-209ENST00000578904 MYL7Q01449 175 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 SYCP1Q15431 976 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 EXOC3L4Q17RC7 722 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 HS1BP3Q53T59 392 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 UBXN11Q5T124 520 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.08■□□□□ 0
CSNK1D-209ENST00000578904 RTN4RL1Q86UN2 441 aaPredicted RBP15.08■□□□□ 0
CSNK1D-209ENST00000578904 CNGA4Q8IV77 575 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 FMNL3Q8IVF7 1028 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 BRSK2Q8IWQ3 736 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 THNSL1Q8IYQ7 743 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 PARD3BQ8TEW8 1205 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 CACTINQ8WUQ7 758 aaKnown RBP15.08■□□□□ 0
CSNK1D-209ENST00000578904 CCDC127Q96BQ5 260 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 RNPC3Q96LT9 517 aaKnown RBP15.08■□□□□ 0
CSNK1D-209ENST00000578904 ACAP3Q96P50 834 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 TSPAN18Q96SJ8 248 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 EIF2AQ9BY44 585 aaKnown RBP15.08■□□□□ 0
CSNK1D-209ENST00000578904 EDEM3Q9BZQ6 932 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 CDT1Q9H211 546 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 MMRN2Q9H8L6 949 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 TOPORSQ9NS56 1045 aaPredicted RBP15.08■□□□□ 0
CSNK1D-209ENST00000578904 FAM105AQ9NUU6 356 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 ANK1P16157 1881 aa15.08■□□□□ 0
CSNK1D-209ENST00000578904 TRIP11Q15643 1979 aa15.07■□□□□ 0
CSNK1D-209ENST00000578904 C9IYK1 514 aa15.07■□□□□ 0
CSNK1D-209ENST00000578904 DLATP10515 647 aaKnown RBP15.07■□□□□ 0
CSNK1D-209ENST00000578904 PBX1P40424 430 aa15.07■□□□□ 0
CSNK1D-209ENST00000578904 MXI1P50539 228 aa15.07■□□□□ 0
CSNK1D-209ENST00000578904 DEFB103AP81534 67 aa15.07■□□□□ 0
CSNK1D-209ENST00000578904 FIGNQ5HY92 759 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms