RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 ATMQ13315 3056 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 WDR27A2RRH5 827 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 MOSPD3O75425 235 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 STBD1O95210 358 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 CAVIN2O95810 425 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 PSAPP07602 524 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 HOXA6P31267 233 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 PON2Q15165 354 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 WWC2Q6AWC2 1192 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 CEP57Q86XR8 500 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 ZNF654Q8IZM8 581 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 MDM1Q8TC05 714 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 IRF7Q92985 503 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 GJA10Q969M2 543 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 CXCL16Q9H2A7 254 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 ZFP14Q9HCL3 533 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 TMEM9BQ9NQ34 198 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 SNTG2Q9NY99 539 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 INVSQ9Y283 1065 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 PIEZO2Q9H5I5 2752 aa12.43□□□□□ -0.42
GGA3-206ENST00000578773 COL12A1Q99715 3063 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 IGKV6-21A0A0C4DH24 114 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 BCLAF3A2AJT9 711 aaKnown RBP12.42□□□□□ -0.42
GGA3-206ENST00000578773 KIF4AO95239 1232 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 ITGA4P13612 1032 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 ZNF76P36508 570 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 SREBF1P36956 1147 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 SIM1P81133 766 aaPredicted RBP12.42□□□□□ -0.42
GGA3-206ENST00000578773 CCINQ13939 588 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 LRRC32Q14392 662 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 ZNF746Q6NUN9 644 aaPredicted RBP12.42□□□□□ -0.42
GGA3-206ENST00000578773 CATIPQ7Z7H3 387 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 HS6ST3Q8IZP7 471 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 IGDCC4Q8TDY8 1250 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 PIK3R5Q8WYR1 880 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 ZFYVE19Q96K21 471 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 FAM167AQ96KS9 214 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 ZNF577Q9BSK1 485 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 DSCC1Q9BVC3 393 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 COLEC11Q9BWP8 271 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 KLK14Q9P0G3 267 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 SUCLA2Q9P2R7 463 aaPredicted RBP12.42□□□□□ -0.42
GGA3-206ENST00000578773 PCDHA10Q9Y5I2 948 aa12.42□□□□□ -0.42
GGA3-206ENST00000578773 MUC22E2RYF6 1773 aaPredicted RBP12.42□□□□□ -0.42
GGA3-206ENST00000578773 ZNF638Q14966 1978 aaKnown RBP12.41□□□□□ -0.42
GGA3-206ENST00000578773 SPECC1L-ADORA2AF8WAN1 911 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 PYCARD-AS1I3L0S3 204 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 POU2F2P09086 479 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 PSMC3P17980 439 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 AKAP5P24588 427 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 OR1D2P34982 312 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 IRX4P78413 519 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 C19orf57Q0VDD7 668 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 FAM171A1Q5VUB5 890 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 CPB2Q96IY4 423 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 HHIPQ96QV1 700 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 HNRNPABQ99729 332 aaKnown RBP12.41□□□□□ -0.42
GGA3-206ENST00000578773 CORO1BQ9BR76 489 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 NXF3Q9H4D5 531 aaKnown RBP12.41□□□□□ -0.42
GGA3-206ENST00000578773 TRPV5Q9NQA5 729 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 SEPT9Q9UHD8 586 aaPredicted RBP12.41□□□□□ -0.42
GGA3-206ENST00000578773 SAMM50Q9Y512 469 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 PCDH15Q96QU1 1955 aa12.41□□□□□ -0.42
GGA3-206ENST00000578773 FAM221BA6H8Z2 402 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 ZNF263O14978 683 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 MEFVO15553 781 aaPredicted RBP12.4□□□□□ -0.42
GGA3-206ENST00000578773 CHMP2AO43633 222 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 CTHP32929 405 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 MFAP1P55081 439 aaKnown RBP12.4□□□□□ -0.42
GGA3-206ENST00000578773 CREMQ03060 361 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 NIPA1Q7RTP0 329 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 ZNF410Q86VK4 478 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 GPR65Q8IYL9 337 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 ZNF710Q8N1W2 664 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 CTCFLQ8NI51 663 aaPredicted RBP12.4□□□□□ -0.42
GGA3-206ENST00000578773 CRYGNQ8WXF5 182 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 LRRC3BQ96PB8 259 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 TTPALQ9BTX7 342 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 RIC8AQ9NPQ8 531 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 FSCN3Q9NQT6 498 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 GTSE1Q9NYZ3 720 aa12.4□□□□□ -0.42
GGA3-206ENST00000578773 DENND4CQ5VZ89 1909 aa12.39□□□□□ -0.43
GGA3-206ENST00000578773 CASTOR2A6NHX0 329 aa12.39□□□□□ -0.43
GGA3-206ENST00000578773 HEPACAM2A8MVW5 462 aa12.39□□□□□ -0.43
GGA3-206ENST00000578773 TADA2AO75478 443 aa12.39□□□□□ -0.43
GGA3-206ENST00000578773 CYP21A2P08686 494 aa12.39□□□□□ -0.43
GGA3-206ENST00000578773 MAPK8P45983 427 aa12.39□□□□□ -0.43
GGA3-206ENST00000578773 CLK2P49760 499 aaKnown RBP12.39□□□□□ -0.43
GGA3-206ENST00000578773 KPNA1P52294 538 aaPredicted RBP12.39□□□□□ -0.43
GGA3-206ENST00000578773 RAB33AQ14088 237 aa12.39□□□□□ -0.43
GGA3-206ENST00000578773 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
GGA3-206ENST00000578773 ANKRD45Q5TZF3 282 aa12.39□□□□□ -0.43
GGA3-206ENST00000578773 JAKMIP3Q5VZ66 844 aa12.39□□□□□ -0.43
GGA3-206ENST00000578773 PLA2G4FQ68DD2 849 aa12.39□□□□□ -0.43
GGA3-206ENST00000578773 CDR2LQ86X02 465 aaPredicted RBP12.39□□□□□ -0.43
GGA3-206ENST00000578773 PLEKHM2Q8IWE5 1019 aa12.39□□□□□ -0.43
GGA3-206ENST00000578773 SMAP1Q8IYB5 467 aaPredicted RBP12.39□□□□□ -0.43
GGA3-206ENST00000578773 ZNF579Q8NAF0 562 aaKnown RBP12.39□□□□□ -0.43
GGA3-206ENST00000578773 SMARCD2Q92925 531 aa12.39□□□□□ -0.43
GGA3-206ENST00000578773 NRBP2Q9NSY0 501 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms