RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 DTHD1Q6ZMT9 781 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 C8orf86Q6ZUL3 223 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 FRMD5Q7Z6J6 570 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 RAB11FIP4Q86YS3 637 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 IL22RA1Q8N6P7 574 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 COLGALT1Q8NBJ5 622 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 KREMEN2Q8NCW0 462 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 PGBD1Q96JS3 809 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 PPP1R16BQ96T49 567 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 SENP7Q9BQF6 1050 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 S1PR5Q9H228 398 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 POMKQ9H5K3 350 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 CWH43Q9H720 699 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 TLE6Q9H808 572 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 ERVK-5Q9HDB9 667 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 ERAP1Q9NZ08 941 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 NOP53Q9NZM5 478 aaKnown RBP4.52□□□□□ -1.69
PTPRM-206ENST00000578093 FAM8A1Q9UBU6 413 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 NOC2LQ9Y3T9 749 aaKnown RBP4.52□□□□□ -1.69
PTPRM-206ENST00000578093 PPME1Q9Y570 386 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 AK5Q9Y6K8 562 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 WDFY3Q8IZQ1 3526 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 MIA3Q5JRA6 1907 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 MYH15Q9Y2K3 1946 aa4.52□□□□□ -1.69
PTPRM-206ENST00000578093 EP300Q09472 2414 aaPredicted RBP4.51□□□□□ -1.69
PTPRM-206ENST00000578093 TMEM238LA0A1B0GVL6 79 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 TBKBP1A7MCY6 615 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 C9IYK1 514 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 IFIT3O14879 490 aaKnown RBP4.51□□□□□ -1.69
PTPRM-206ENST00000578093 STAM2O75886 525 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 CYP21A2P08686 494 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 GSPT1P15170 499 aaKnown RBP4.51□□□□□ -1.69
PTPRM-206ENST00000578093 NBL1P41271 181 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 TECP42680 631 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 SARSP49591 514 aaKnown RBP4.51□□□□□ -1.69
PTPRM-206ENST00000578093 RAC1P63000 192 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 TAGLNQ01995 201 aaKnown RBP4.51□□□□□ -1.69
PTPRM-206ENST00000578093 PTH1RQ03431 593 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 ITGB3BPQ13352 177 aaPredicted RBP4.51□□□□□ -1.69
PTPRM-206ENST00000578093 HDAC1Q13547 482 aaPredicted RBP4.51□□□□□ -1.69
PTPRM-206ENST00000578093 NAALADL2Q58DX5 795 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 DIEXFQ68CQ4 756 aaKnown RBP4.51□□□□□ -1.69
PTPRM-206ENST00000578093 NXPE4Q6UWF7 544 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 LRRC55Q6ZSA7 311 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 FAM228AQ86W67 206 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 SMC5Q8IY18 1101 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 MB21D2Q8IYB1 491 aaPredicted RBP4.51□□□□□ -1.69
PTPRM-206ENST00000578093 SAMD3Q8N6K7 520 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 SMARCC2Q8TAQ2 1214 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 CYP2W1Q8TAV3 490 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 SEPT1Q8WYJ6 367 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 GLG1Q92896 1179 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 PPP2R3CQ969Q6 453 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 GPRASP2Q96D09 838 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 RIPOR3Q96MK2 946 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 NEK1Q96PY6 1258 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 TCF12Q99081 682 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 PRRX2Q99811 253 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 TCF25Q9BQ70 676 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 FTHL17Q9BXU8 183 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 CELF4Q9BZC1 486 aaKnown RBP4.51□□□□□ -1.69
PTPRM-206ENST00000578093 KRT23Q9C075 422 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 CNNM2Q9H8M5 875 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 SRA1Q9HD15 236 aaKnown RBP4.51□□□□□ -1.69
PTPRM-206ENST00000578093 DIAPH3Q9NSV4 1193 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 TYW1Q9NV66 732 aaKnown RBP4.51□□□□□ -1.69
PTPRM-206ENST00000578093 VTI1BQ9UEU0 232 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 GINS2Q9Y248 185 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 HCFC2Q9Y5Z7 792 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 UBIAD1Q9Y5Z9 338 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 OTOGLQ3ZCN5 2332 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 ARID2Q68CP9 1835 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 EPG5Q9HCE0 2579 aa4.51□□□□□ -1.69
PTPRM-206ENST00000578093 KDM3AQ9Y4C1 1321 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 CACNA1BQ00975 2339 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 DOCK6Q96HP0 2047 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 SMIM35A0A1B0GVV1 85 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 MED19A0JLT2 244 aaPredicted RBP4.5□□□□□ -1.69
PTPRM-206ENST00000578093 E7EWF7 191 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 H3BRJ5 948 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 DDX39AO00148 427 aaKnown RBP4.5□□□□□ -1.69
PTPRM-206ENST00000578093 ADAMTS3O15072 1205 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 RPS6KA5O75582 802 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 CCNE2O96020 404 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 IGHDP01880 384 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 STAG3L1P0CL83 205 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 NID1P14543 1247 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 ITPKAP23677 461 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 NT5C2P49902 561 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 ACTR2P61160 394 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 SNRPNP63162 240 aaKnown RBP4.5□□□□□ -1.69
PTPRM-206ENST00000578093 UBE3AQ05086 875 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 MTMR1Q13613 665 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 WTAPQ15007 396 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 PKN1Q16512 942 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 KIZQ2M2Z5 673 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 PRRT3Q5FWE3 981 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 CLLU1OSQ5K130 101 aa4.5□□□□□ -1.69
PTPRM-206ENST00000578093 SPOUT1Q5T280 376 aaKnown RBP4.5□□□□□ -1.69
PTPRM-206ENST00000578093 MCTP1Q6DN14 999 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms